Variant report

Variant rs5752197
Chromosome Location chr22:20751666-20751667
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:122 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr22:20749000-20755000 Weak transcription Aorta Aorta
2 chr22:20749200-20758200 Weak transcription Right Ventricle heart
3 chr22:20749600-20752000 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
4 chr22:20749600-20756000 Weak transcription Brain Substantia Nigra brain
5 chr22:20749600-20756200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
6 chr22:20749600-20759600 Weak transcription A549 lung
7 chr22:20749600-20760800 Weak transcription NH-A brain
8 chr22:20749600-20764400 Weak transcription Pancreatic Islets Pancreatic Islet
9 chr22:20749800-20751800 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
10 chr22:20749800-20751800 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
11 chr22:20749800-20754800 Weak transcription Rectal Mucosa Donor 29 rectum
12 chr22:20749800-20758800 Weak transcription Small Intestine intestine
13 chr22:20749800-20759000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
14 chr22:20749800-20759000 Weak transcription Placenta Amnion Placenta Amnion
15 chr22:20749800-20759600 Weak transcription Colonic Mucosa Colon
16 chr22:20750000-20753200 Weak transcription Liver Liver
17 chr22:20750000-20754600 Weak transcription Fetal Intestine Small intestine
18 chr22:20750000-20754800 Weak transcription Thymus Thymus
19 chr22:20750000-20755000 Weak transcription Fetal Intestine Large intestine
20 chr22:20750000-20755000 Weak transcription Placenta Placenta
21 chr22:20750000-20755200 Weak transcription Skeletal Muscle Male skeletal muscle
22 chr22:20750000-20755400 Weak transcription Primary B cells from peripheral blood blood
23 chr22:20750000-20757600 Weak transcription Rectal Mucosa Donor 31 rectum
24 chr22:20750000-20760600 Weak transcription HMEC breast
25 chr22:20750000-20766000 Weak transcription HUVEC blood vessel
26 chr22:20750000-20766800 Weak transcription Hela-S3 cervix
27 chr22:20750200-20754200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
28 chr22:20750200-20754200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
29 chr22:20750200-20754200 Weak transcription Fetal Muscle Trunk muscle
30 chr22:20750200-20754400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
31 chr22:20750200-20754600 Weak transcription H9 Cell Line embryonic stem cell
32 chr22:20750200-20754600 Weak transcription Primary T regulatory cells fromperipheralblood blood
33 chr22:20750200-20754600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
34 chr22:20750200-20754800 Weak transcription HUES64 Cell Line embryonic stem cell
35 chr22:20750200-20754800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
36 chr22:20750200-20754800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
37 chr22:20750200-20754800 Weak transcription Brain Anterior Caudate brain
38 chr22:20750200-20755000 Weak transcription Primary T cells from cord blood blood
39 chr22:20750200-20755000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
40 chr22:20750200-20755000 Weak transcription Ovary ovary
41 chr22:20750200-20755000 Weak transcription Stomach Smooth Muscle stomach
42 chr22:20750200-20755200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
43 chr22:20750200-20755200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
44 chr22:20750200-20755200 Weak transcription Gastric stomach
45 chr22:20750200-20755200 Weak transcription Spleen Spleen
46 chr22:20750200-20755400 Weak transcription Duodenum Smooth Muscle Duodenum
47 chr22:20750200-20755400 Weak transcription Lung lung
48 chr22:20750200-20755600 Weak transcription Esophagus oesophagus
49 chr22:20750200-20757400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
50 chr22:20750200-20757400 Weak transcription Primary T helper 17 cells PMA-I stimulated --

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