Variant report

Variant rs5752397
Chromosome Location chr22:21344055-21344056
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr22:21337600-21345000 Weak transcription HUES48 Cell Line embryonic stem cell
2 chr22:21337600-21346000 Weak transcription H1 Cell Line embryonic stem cell
3 chr22:21337600-21346200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr22:21337600-21346400 Weak transcription Psoas Muscle Psoas
5 chr22:21337600-21352000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
6 chr22:21337600-21353000 Weak transcription Primary B cells from cord blood blood
7 chr22:21337600-21354000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
8 chr22:21337600-21354200 Strong transcription Fetal Intestine Small intestine
9 chr22:21337600-21354400 Weak transcription Fetal Heart heart
10 chr22:21337600-21354600 Weak transcription Fetal Kidney kidney
11 chr22:21337600-21354600 Weak transcription Pancreatic Islets Pancreatic Islet
12 chr22:21337800-21345600 Weak transcription iPS-15b Cell Line embryonic stem cell
13 chr22:21337800-21346200 Weak transcription Fetal Lung lung
14 chr22:21337800-21354200 Weak transcription Hela-S3 cervix
15 chr22:21337800-21354400 Strong transcription Fetal Muscle Leg muscle
16 chr22:21337800-21354800 Strong transcription Thymus Thymus
17 chr22:21337800-21355200 Weak transcription ES-I3 Cell Line embryonic stem cell
18 chr22:21337800-21355200 Weak transcription Small Intestine intestine
19 chr22:21338000-21344600 Strong transcription Fetal Adrenal Gland Adrenal Gland
20 chr22:21338000-21345000 Weak transcription Right Atrium heart
21 chr22:21338000-21354800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
22 chr22:21338200-21346000 Weak transcription Stomach Mucosa stomach
23 chr22:21338200-21354000 Strong transcription Brain Hippocampus Middle brain
24 chr22:21338200-21354200 Strong transcription Placenta Placenta
25 chr22:21338200-21354400 Strong transcription NHLF lung
26 chr22:21338200-21354600 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
27 chr22:21338400-21350400 Weak transcription GM12878-XiMat blood
28 chr22:21338400-21353000 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
29 chr22:21338400-21353000 Strong transcription Skeletal Muscle Female skeletal muscle
30 chr22:21338400-21353800 Strong transcription Fetal Stomach stomach
31 chr22:21338400-21353800 Strong transcription Stomach Smooth Muscle stomach
32 chr22:21338400-21354000 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
33 chr22:21338400-21354000 Strong transcription Fetal Muscle Trunk muscle
34 chr22:21338400-21354200 Strong transcription Lung lung
35 chr22:21338400-21354600 Strong transcription Brain Cingulate Gyrus brain
36 chr22:21338400-21354600 Strong transcription Monocytes-CD14+_RO01746 blood
37 chr22:21338600-21353600 Weak transcription Fetal Brain Male brain
38 chr22:21338600-21353600 Strong transcription Skeletal Muscle Male skeletal muscle
39 chr22:21340000-21354000 Strong transcription Colon Smooth Muscle Colon
40 chr22:21340000-21354400 Strong transcription Duodenum Mucosa Duodenum
41 chr22:21340400-21345000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
42 chr22:21340400-21345600 Weak transcription Aorta Aorta
43 chr22:21341000-21345800 Weak transcription A549 lung
44 chr22:21341200-21344800 Weak transcription Rectal Smooth Muscle rectum
45 chr22:21341200-21345000 Weak transcription Brain Angular Gyrus brain
46 chr22:21341200-21353800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
47 chr22:21341400-21345800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
48 chr22:21341400-21351400 Strong transcription Placenta Amnion Placenta Amnion
49 chr22:21341600-21354600 Strong transcription NHEK skin
50 chr22:21341800-21352400 Strong transcription Spleen Spleen

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