The 2.0 version of rSNPBase

Variant report

Variant rs575280720
Chromosome Location chr19:19699114-19699115
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:40 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:19671600-19701800 Weak transcription Stomach Smooth Muscle stomach
2 chr19:19672000-19704800 Weak transcription Brain Angular Gyrus brain
3 chr19:19674200-19699800 Weak transcription Primary T killer naive cells fromperipheralblood blood
4 chr19:19676200-19701600 Weak transcription GM12878-XiMat blood
5 chr19:19681200-19701600 Weak transcription NHLF lung
6 chr19:19681400-19701600 Weak transcription Fetal Lung lung
7 chr19:19681600-19701600 Weak transcription Esophagus oesophagus
8 chr19:19681600-19703200 Weak transcription Dnd41 blood
9 chr19:19682000-19702200 Weak transcription Breast Myoepithelial Primary Cells Breast
10 chr19:19682600-19700600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
11 chr19:19686600-19700600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
12 chr19:19687000-19701600 Weak transcription iPS-15b Cell Line embryonic stem cell
13 chr19:19689800-19700600 Weak transcription Thymus Thymus
14 chr19:19689800-19701800 Weak transcription Fetal Brain Female brain
15 chr19:19691200-19699600 Weak transcription Primary T helper naive cells from peripheral blood blood
16 chr19:19691200-19700600 Weak transcription Primary T cells from cord blood blood
17 chr19:19691400-19699200 Weak transcription Primary T helper naive cells fromperipheralblood blood
18 chr19:19691400-19699400 Weak transcription Primary T killer memory cells from peripheral blood blood
19 chr19:19693000-19701600 Weak transcription Fetal Stomach stomach
20 chr19:19693200-19701000 Weak transcription Duodenum Mucosa Duodenum
21 chr19:19693200-19702200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
22 chr19:19693400-19700400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
23 chr19:19693400-19700600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
24 chr19:19693800-19699400 Weak transcription Primary T cells fromperipheralblood blood
25 chr19:19696000-19700600 Weak transcription Primary T regulatory cells fromperipheralblood blood
26 chr19:19696400-19701600 Weak transcription ES-I3 Cell Line embryonic stem cell
27 chr19:19696600-19702000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
28 chr19:19698400-19702200 Weak transcription Brain Cingulate Gyrus brain
29 chr19:19698600-19699200 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
30 chr19:19698600-19699200 Enhancers Fetal Brain Male brain
31 chr19:19698800-19699200 Enhancers Cortex derived primary cultured neurospheres brain
32 chr19:19698800-19699400 Strong transcription Primary T helper 17 cells PMA-I stimulated --
33 chr19:19698800-19700400 Enhancers Primary T helper cells PMA-I stimulated --
34 chr19:19698800-19708400 Enhancers Primary T helper memory cells from peripheral blood 2 blood
35 chr19:19699000-19699600 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
36 chr19:19699000-19699600 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
37 chr19:19699000-19699600 Weak transcription Brain Germinal Matrix brain
38 chr19:19699000-19700000 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
39 chr19:19699000-19700000 Enhancers NHDF-Ad bronchial
40 chr19:19699000-19703200 Enhancers Primary T helper cells fromperipheralblood blood

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Last update: Aug 31, 2015