Variant report

Variant	rs57528325
Chromosome Location	chr12:45845229-45845230
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 7 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:6)

rs_ID	r²[population]
rs56404222	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs60385087	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73283368	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73283376	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73283379	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73283381	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832395	chr12:45841765-46039297	Weak transcription Enhancers Active TSS Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:45845200-45846200	Enhancers	Primary hematopoietic stem cells short term culture	blood
2	chr12:45845200-45846200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
3	chr12:45845200-45846400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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