Variant report

Variant	rs575317977
Chromosome Location	chr1:56387302-56387303
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1818340	chr1:56359741-56408597	Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
2	esv3398650	chr1:56387164-56390862	Enhancers Weak transcription	Chromatin interactive region lncRNA	n/a	inside rSNPs	n/a

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:56382600-56393400	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
2	chr1:56382800-56392800	Weak transcription	Fetal Lung	lung
3	chr1:56383000-56393400	Weak transcription	Rectal Smooth Muscle	rectum
4	chr1:56386200-56387600	Enhancers	Breast Myoepithelial Primary Cells	Breast
5	chr1:56386400-56387600	Enhancers	Placenta Amnion	Placenta Amnion
6	chr1:56386800-56387800	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
7	chr1:56386800-56392800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
8	chr1:56386800-56395400	Weak transcription	Placenta	Placenta
9	chr1:56386800-56396600	Weak transcription	Esophagus	oesophagus
10	chr1:56387000-56387800	Enhancers	Adipose Nuclei	Adipose

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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