Variant report

Variant	rs575339131
Chromosome Location	chr11:94224145-94224146
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr11:94213347..94215361-chr11:94222222..94224695,2	K562	blood:
2	chr11:94219714..94224180-chr11:94224527..94226991,4	MCF-7	breast:
3	chr11:94217826..94221118-chr11:94222264..94225071,4	K562	blood:
4	chr11:94223520..94226395-chr11:94275795..94278274,2	K562	blood:
5	chr11:94222232..94224873-chr11:94225304..94228914,3	K562	blood:
6	chr11:94219618..94222085-chr11:94222930..94224543,2	K562	blood:

Variant related genes	Relation type
ENSG00000168876	Chromatin interaction
ENSG00000020922	Chromatin interaction
ENSG00000196371	Chromatin interaction
ENSG00000134627	Chromatin interaction

Extended variants
information (count: 6 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:6 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1795745	chr11:94144987-94227993	Flanking Active TSS Strong transcription Weak transcription Genic enhancers Active TSS Transcr. at gene 5' and 3' Enhancers ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	16 gene(s)	inside rSNPs	diseases
2	esv1798271	chr11:94144987-94227993	Strong transcription Weak transcription Enhancers Active TSS Flanking Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	16 gene(s)	inside rSNPs	diseases
3	esv1797582	chr11:94182992-94227993	Weak transcription Flanking Active TSS Strong transcription Active TSS ZNF genes & repeats Genic enhancers Enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	15 gene(s)	inside rSNPs	diseases
4	esv1800372	chr11:94182992-94227993	Active TSS Weak transcription Strong transcription Enhancers Flanking Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	15 gene(s)	inside rSNPs	diseases
5	esv1794580	chr11:94224060-94227993	Weak transcription Enhancers Active TSS Flanking Active TSS Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	12 gene(s)	inside rSNPs	diseases
6	esv1796910	chr11:94224060-94227993	Weak transcription Flanking Active TSS Enhancers Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Strong transcription	TF binding region CpG island Chromatin interactive region	12 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:124 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:94157400-94226200	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr11:94157600-94226400	Weak transcription	Esophagus	oesophagus
3	chr11:94162800-94225800	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
4	chr11:94167400-94226400	Weak transcription	Small Intestine	intestine
5	chr11:94179000-94226000	Weak transcription	Colonic Mucosa	Colon
6	chr11:94180600-94225800	Weak transcription	Brain Substantia Nigra	brain
7	chr11:94181000-94226400	Weak transcription	Pancreas	Pancrea
8	chr11:94183600-94225800	Weak transcription	NHLF	lung
9	chr11:94184400-94225800	Weak transcription	NHDF-Ad	bronchial
10	chr11:94194600-94225000	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
11	chr11:94194600-94225000	Weak transcription	Fetal Brain Male	brain
12	chr11:94197400-94224600	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
13	chr11:94197600-94225600	Weak transcription	Fetal Heart	heart
14	chr11:94198400-94224400	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
15	chr11:94203000-94225800	Weak transcription	Pancreatic Islets	Pancreatic Islet
16	chr11:94206600-94225800	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
17	chr11:94206600-94226000	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
18	chr11:94206800-94226000	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
19	chr11:94208000-94224600	Strong transcription	HUES64 Cell Line	embryonic stem cell
20	chr11:94208000-94225600	Weak transcription	iPS-15b Cell Line	embryonic stem cell
21	chr11:94210200-94226200	Weak transcription	Aorta	Aorta
22	chr11:94211200-94226200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
23	chr11:94213400-94224600	Strong transcription	Primary hematopoietic stem cells short term culture	blood
24	chr11:94214200-94225200	Weak transcription	Placenta Amnion	Placenta Amnion
25	chr11:94214200-94226000	Weak transcription	HSMMtube	muscle
26	chr11:94216000-94225800	Weak transcription	Osteobl	bone
27	chr11:94216800-94226400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
28	chr11:94217000-94225800	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
29	chr11:94217000-94226400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
30	chr11:94217000-94226400	Weak transcription	Gastric	stomach
31	chr11:94217000-94226600	Weak transcription	Spleen	Spleen
32	chr11:94218000-94225800	Weak transcription	Colon Smooth Muscle	Colon
33	chr11:94218200-94225000	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
34	chr11:94218200-94225200	Weak transcription	Primary T helper naive cells from peripheral blood	blood
35	chr11:94218200-94225400	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
36	chr11:94219000-94225400	Weak transcription	Fetal Intestine Small	intestine
37	chr11:94220000-94225000	Weak transcription	HUVEC	blood vessel
38	chr11:94220800-94225400	Weak transcription	Muscle Satellite Cultured Cells	--
39	chr11:94221400-94224600	Strong transcription	Hela-S3	cervix
40	chr11:94221400-94225800	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
41	chr11:94221600-94225200	Weak transcription	Psoas Muscle	Psoas
42	chr11:94222000-94225800	Weak transcription	Brain Anterior Caudate	brain
43	chr11:94222000-94225800	Weak transcription	Fetal Kidney	kidney
44	chr11:94222600-94225400	Weak transcription	Cortex derived primary cultured neurospheres	brain
45	chr11:94222600-94225800	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
46	chr11:94222600-94226200	Weak transcription	Right Ventricle	heart
47	chr11:94223000-94225800	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
48	chr11:94223200-94226000	Weak transcription	Skeletal Muscle Male	skeletal muscle
49	chr11:94223400-94225800	Weak transcription	H9 Cell Line	embryonic stem cell
50	chr11:94223400-94225800	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin

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