Variant report
| Variant | rs57540835 |
|---|---|
| Chromosome Location | chr2:173200905-173200906 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr2:173195400-173204000 | Weak transcription | Left Ventricle | heart |
| 2 | chr2:173195400-173204000 | Weak transcription | Right Ventricle | heart |
| 3 | chr2:173197600-173204000 | Weak transcription | Fetal Muscle Trunk | muscle |
| 4 | chr2:173197600-173204400 | Weak transcription | Thymus | Thymus |
| 5 | chr2:173197800-173204000 | Enhancers | Duodenum Mucosa | Duodenum |
| 6 | chr2:173198400-173201800 | Weak transcription | Small Intestine | intestine |
| 7 | chr2:173198400-173204400 | Weak transcription | Brain Substantia Nigra | brain |
| 8 | chr2:173198600-173204000 | Weak transcription | Brain Hippocampus Middle | brain |
| 9 | chr2:173198600-173204000 | Weak transcription | Fetal Thymus | thymus |
| 10 | chr2:173198600-173204000 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
| 11 | chr2:173198600-173204200 | Weak transcription | Fetal Lung | lung |
| 12 | chr2:173198800-173203600 | Weak transcription | Fetal Muscle Leg | muscle |
| 13 | chr2:173198800-173204000 | Weak transcription | Breast Myoepithelial Primary Cells | Breast |
| 14 | chr2:173198800-173204000 | Weak transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 15 | chr2:173199000-173203000 | Enhancers | Colonic Mucosa | Colon |
| 16 | chr2:173199600-173201800 | Enhancers | Placenta Amnion | Placenta Amnion |
| 17 | chr2:173199600-173208000 | Enhancers | Stomach Mucosa | stomach |
| 18 | chr2:173199800-173203200 | Enhancers | Fetal Intestine Large | intestine |
| 19 | chr2:173199800-173205000 | Enhancers | Fetal Intestine Small | intestine |
| 20 | chr2:173200000-173201400 | Weak transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 21 | chr2:173200000-173204200 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
| 22 | chr2:173200200-173202000 | Weak transcription | Lung | lung |
| 23 | chr2:173200400-173201000 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 24 | chr2:173200400-173201600 | Weak transcription | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 25 | chr2:173200400-173202400 | Bivalent Enhancer | HepG2 | liver |
| 26 | chr2:173200400-173204000 | Weak transcription | HSMMtube | muscle |
| 27 | chr2:173200600-173201000 | Flanking Active TSS | Rectal Mucosa Donor 31 | rectum |
| 28 | chr2:173200600-173202000 | Enhancers | Rectal Mucosa Donor 29 | rectum |
| 29 | chr2:173200800-173202000 | Weak transcription | Gastric | stomach |
| 30 | chr2:173200800-173202000 | Weak transcription | Pancreas | Pancrea |
