Variant report

Variant	rs57550344
Chromosome Location	chr8:91529426-91529427
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 22 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs57820529	1.00[AMR][1000 genomes]
rs57982498	1.00[AMR][1000 genomes]
rs57995155	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs59588987	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs61305476	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73303917	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73303921	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73303924	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73303926	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73303930	0.93[AFR][1000 genomes]
rs73303944	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73303958	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73303965	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73303968	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73303972	1.00[AMR][1000 genomes]
rs73303973	1.00[AMR][1000 genomes]
rs73303974	1.00[AMR][1000 genomes]
rs73303980	1.00[AMR][1000 genomes]
rs73303981	1.00[AMR][1000 genomes]
rs73303984	1.00[AMR][1000 genomes]
rs73303987	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv981885	chr8:91528144-91537088	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	2 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:91522000-91532400	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
2	chr8:91529200-91529600	Enhancers	H9 Cell Line	embryonic stem cell
3	chr8:91529200-91529600	Enhancers	K562	blood

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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