The 2.0 version of rSNPBase

Variant report

Variant rs575571062
Chromosome Location chr7:128179879-128179880
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:121 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:128172600-128184800 Weak transcription Spleen Spleen
2 chr7:128172600-128187600 Weak transcription Pancreas Pancrea
3 chr7:128172600-128189800 Weak transcription Placenta Amnion Placenta Amnion
4 chr7:128172600-128191000 Weak transcription Ovary ovary
5 chr7:128172600-128191200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
6 chr7:128172600-128193400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
7 chr7:128172600-128210800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
8 chr7:128172600-128214800 Weak transcription Gastric stomach
9 chr7:128172800-128239800 Weak transcription Small Intestine intestine
10 chr7:128173000-128188000 Weak transcription iPS-15b Cell Line embryonic stem cell
11 chr7:128173000-128190400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
12 chr7:128173000-128190800 Weak transcription H9 Cell Line embryonic stem cell
13 chr7:128173000-128231800 Weak transcription Colonic Mucosa Colon
14 chr7:128173000-128231800 Weak transcription Fetal Kidney kidney
15 chr7:128173200-128183200 Weak transcription Rectal Mucosa Donor 31 rectum
16 chr7:128173400-128188200 Weak transcription Fetal Brain Male brain
17 chr7:128173600-128181200 Weak transcription Fetal Intestine Large intestine
18 chr7:128173600-128187200 Weak transcription Brain Anterior Caudate brain
19 chr7:128173600-128201000 Weak transcription Psoas Muscle Psoas
20 chr7:128173600-128214800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
21 chr7:128173800-128183000 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
22 chr7:128173800-128183200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
23 chr7:128173800-128183200 Weak transcription Primary T killer naive cells fromperipheralblood blood
24 chr7:128173800-128184800 Weak transcription Fetal Lung lung
25 chr7:128173800-128186600 Weak transcription Brain Inferior Temporal Lobe brain
26 chr7:128173800-128186800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
27 chr7:128173800-128186800 Weak transcription Stomach Smooth Muscle stomach
28 chr7:128173800-128186800 Weak transcription HMEC breast
29 chr7:128173800-128186800 Weak transcription NHDF-Ad bronchial
30 chr7:128173800-128187000 Weak transcription Primary B cells from cord blood blood
31 chr7:128173800-128187400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
32 chr7:128173800-128190800 Weak transcription Brain Substantia Nigra brain
33 chr7:128173800-128191000 Weak transcription Brain Angular Gyrus brain
34 chr7:128173800-128197800 Weak transcription Right Atrium heart
35 chr7:128173800-128199800 Weak transcription Right Ventricle heart
36 chr7:128173800-128201000 Weak transcription Brain Germinal Matrix brain
37 chr7:128173800-128214800 Weak transcription Rectal Smooth Muscle rectum
38 chr7:128173800-128234400 Weak transcription Pancreatic Islets Pancreatic Islet
39 chr7:128174000-128180200 Weak transcription Primary T regulatory cells fromperipheralblood blood
40 chr7:128174000-128183200 Weak transcription Primary hematopoietic stem cells blood
41 chr7:128174000-128185400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
42 chr7:128174000-128186800 Weak transcription Colon Smooth Muscle Colon
43 chr7:128174000-128187000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
44 chr7:128174000-128187000 Weak transcription NHEK skin
45 chr7:128174000-128210600 Weak transcription Primary T killer memory cells from peripheral blood blood
46 chr7:128174000-128220600 Weak transcription NHLF lung
47 chr7:128174000-128231800 Weak transcription Brain Cingulate Gyrus brain
48 chr7:128174000-128232600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
49 chr7:128174200-128181800 Weak transcription HSMMtube muscle
50 chr7:128174200-128183000 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived

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Last update: Aug 31, 2015