Variant report

Variant	rs575596473
Chromosome Location	chr6:163792741-163792742
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv932127	chr6:163000261-163950870	Enhancers Weak transcription Flanking Active TSS Active TSS Genic enhancers ZNF genes & repeats Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
2	nsv1022610	chr6:163591786-163814041	Weak transcription Enhancers Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats Strong transcription Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
3	nsv534621	chr6:163731741-163950870	Bivalent/Poised TSS Enhancers Flanking Active TSS Weak transcription Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
4	nsv970668	chr6:163792636-163802489	Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Active TSS	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:17 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:163791000-163792800	Enhancers	Brain Cingulate Gyrus	brain
2	chr6:163791000-163792800	Enhancers	Brain Inferior Temporal Lobe	brain
3	chr6:163791000-163794200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
4	chr6:163791000-163794200	Weak transcription	Left Ventricle	heart
5	chr6:163791000-163813000	Weak transcription	Right Atrium	heart
6	chr6:163791200-163793800	Weak transcription	Spleen	Spleen
7	chr6:163791200-163794200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
8	chr6:163791400-163792800	Enhancers	Brain Angular Gyrus	brain
9	chr6:163791400-163792800	Enhancers	Brain Anterior Caudate	brain
10	chr6:163791600-163792800	Enhancers	Brain Substantia Nigra	brain
11	chr6:163791600-163793800	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
12	chr6:163791800-163792800	Enhancers	Fetal Brain Male	brain
13	chr6:163792200-163794200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
14	chr6:163792400-163793200	Weak transcription	Fetal Heart	heart
15	chr6:163792400-163796200	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
16	chr6:163792400-163796400	Weak transcription	Cortex derived primary cultured neurospheres	brain
17	chr6:163792600-163792800	Enhancers	Brain Germinal Matrix	brain

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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