Variant report

Variant	rs575813804
Chromosome Location	chr7:32965205-32965206
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr7:32953601..32955198-chr7:32963483..32966241,2	K562	blood:
2	chr7:32964311..32966953-chr7:32967722..32970087,2	K562	blood:
3	chr7:32964311..32967262-chr7:32967722..32972400,5	K562	blood:

Extended variants
information (count: 7 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:7 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1029220	chr7:32921484-33262190	ZNF genes & repeats Weak transcription Active TSS Flanking Active TSS Strong transcription Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	83 gene(s)	inside rSNPs	diseases
2	esv3478254	chr7:32956181-33133477	Strong transcription Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	47 gene(s)	inside rSNPs	diseases
3	esv3478255	chr7:32956181-33133477	Enhancers Flanking Active TSS Weak transcription Strong transcription Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	47 gene(s)	inside rSNPs	diseases
4	esv3528603	chr7:32956254-33133429	Active TSS Enhancers Weak transcription Flanking Active TSS Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	47 gene(s)	inside rSNPs	diseases
5	esv3528604	chr7:32956254-33133429	Strong transcription Enhancers Active TSS Weak transcription Genic enhancers Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	47 gene(s)	inside rSNPs	diseases
6	esv3366191	chr7:32956659-33134592	Enhancers Strong transcription Weak transcription Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	47 gene(s)	inside rSNPs	diseases
7	nsv1033096	chr7:32965040-33039206	Weak transcription Flanking Bivalent TSS/Enh Enhancers Strong transcription Flanking Active TSS Active TSS Bivalent Enhancer Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	37 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:92 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:32945200-32971200	Weak transcription	Fetal Heart	heart
2	chr7:32945600-32969000	Weak transcription	Colonic Mucosa	Colon
3	chr7:32947600-32981200	Weak transcription	Stomach Mucosa	stomach
4	chr7:32953600-32973600	Strong transcription	Fetal Adrenal Gland	Adrenal Gland
5	chr7:32955000-32976000	Weak transcription	Right Ventricle	heart
6	chr7:32955000-32981000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
7	chr7:32956400-32966400	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
8	chr7:32956400-32966400	Weak transcription	Placenta Amnion	Placenta Amnion
9	chr7:32956400-32967600	Weak transcription	Brain Hippocampus Middle	brain
10	chr7:32956600-32981000	Weak transcription	Primary monocytes fromperipheralblood	blood
11	chr7:32956600-32981000	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
12	chr7:32956800-32967600	Weak transcription	Aorta	Aorta
13	chr7:32956800-32967600	Weak transcription	Brain Angular Gyrus	brain
14	chr7:32956800-32967600	Weak transcription	Gastric	stomach
15	chr7:32956800-32967600	Weak transcription	Lung	lung
16	chr7:32956800-32967600	Weak transcription	Pancreas	Pancrea
17	chr7:32956800-32967600	Weak transcription	Sigmoid Colon	Sigmoid Colon
18	chr7:32956800-32967600	Weak transcription	Spleen	Spleen
19	chr7:32956800-32967800	Weak transcription	Brain Cingulate Gyrus	brain
20	chr7:32956800-32969000	Weak transcription	Esophagus	oesophagus
21	chr7:32957800-32967600	Weak transcription	NHLF	lung
22	chr7:32958200-32967400	Weak transcription	Rectal Mucosa Donor 29	rectum
23	chr7:32958400-32966200	Weak transcription	Colon Smooth Muscle	Colon
24	chr7:32958400-32976400	Weak transcription	Pancreatic Islets	Pancreatic Islet
25	chr7:32958600-32966400	Weak transcription	Rectal Smooth Muscle	rectum
26	chr7:32958600-32966600	Weak transcription	Monocytes-CD14+_RO01746	blood
27	chr7:32958600-32967800	Weak transcription	Primary B cells from cord blood	blood
28	chr7:32958600-32976200	Weak transcription	Psoas Muscle	Psoas
29	chr7:32958800-32966600	Weak transcription	Fetal Lung	lung
30	chr7:32958800-32978600	Weak transcription	Primary hematopoietic stem cells	blood
31	chr7:32959200-32967800	Weak transcription	Fetal Brain Male	brain
32	chr7:32960000-32967400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
33	chr7:32960200-32967600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
34	chr7:32960200-32967600	Weak transcription	Duodenum Mucosa	Duodenum
35	chr7:32960200-32967800	Weak transcription	Liver	Liver
36	chr7:32960400-32967800	Weak transcription	HSMMtube	muscle
37	chr7:32960400-32970800	Weak transcription	Hela-S3	cervix
38	chr7:32960400-32972800	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
39	chr7:32960600-32972000	Strong transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
40	chr7:32960800-32965600	Strong transcription	Muscle Satellite Cultured Cells	--
41	chr7:32961000-32966400	Weak transcription	Left Ventricle	heart
42	chr7:32961000-32966600	Weak transcription	Primary neutrophils fromperipheralblood	blood
43	chr7:32961000-32968800	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
44	chr7:32961400-32967600	Weak transcription	Brain Substantia Nigra	brain
45	chr7:32961600-32966600	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
46	chr7:32961600-32971800	Strong transcription	Foreskin Fibroblast Primary Cells skin01	Skin
47	chr7:32961600-32973600	Strong transcription	Breast Myoepithelial Primary Cells	Breast
48	chr7:32961600-32974600	Strong transcription	Fetal Stomach	stomach
49	chr7:32961800-32966400	Weak transcription	Brain Inferior Temporal Lobe	brain
50	chr7:32961800-32966400	Weak transcription	Duodenum Smooth Muscle	Duodenum

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