Variant report

Variant rs57590287
Chromosome Location chr22:20781670-20781671
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:62 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr22:20773000-20783000 Weak transcription HUVEC blood vessel
2 chr22:20777400-20783200 Weak transcription Dnd41 blood
3 chr22:20778200-20783000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr22:20778200-20785400 Weak transcription HSMM muscle
5 chr22:20778400-20782400 Genic enhancers Foreskin Melanocyte Primary Cells skin01 Skin
6 chr22:20778600-20786200 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
7 chr22:20778600-20789400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
8 chr22:20779000-20785000 Strong transcription Muscle Satellite Cultured Cells --
9 chr22:20779200-20782200 ZNF genes & repeats Spleen Spleen
10 chr22:20779200-20783000 Strong transcription H1 Derived Mesenchymal Stem Cells ES cell derived
11 chr22:20779200-20783400 Weak transcription Brain Angular Gyrus brain
12 chr22:20779200-20784200 Strong transcription Ovary ovary
13 chr22:20779200-20784400 Strong transcription Cortex derived primary cultured neurospheres brain
14 chr22:20779200-20784600 Strong transcription Breast Myoepithelial Primary Cells Breast
15 chr22:20779200-20785000 Weak transcription Left Ventricle heart
16 chr22:20779200-20785600 Strong transcription NHLF lung
17 chr22:20779400-20783200 Weak transcription Brain Hippocampus Middle brain
18 chr22:20779400-20785200 Strong transcription Aorta Aorta
19 chr22:20779600-20783400 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
20 chr22:20779600-20789200 Weak transcription NHDF-Ad bronchial
21 chr22:20779800-20783400 Weak transcription Brain Cingulate Gyrus brain
22 chr22:20780200-20781800 Bivalent Enhancer Fetal Brain Male brain
23 chr22:20780200-20783800 ZNF genes & repeats Fetal Stomach stomach
24 chr22:20780400-20783200 Strong transcription Lung lung
25 chr22:20780400-20783600 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
26 chr22:20780600-20783000 Strong transcription Adipose Nuclei Adipose
27 chr22:20780600-20783400 Strong transcription Stomach Smooth Muscle stomach
28 chr22:20780600-20783800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
29 chr22:20780600-20784200 Strong transcription Fetal Lung lung
30 chr22:20780600-20785200 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
31 chr22:20780600-20785400 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
32 chr22:20780800-20781800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
33 chr22:20780800-20782200 Genic enhancers Foreskin Fibroblast Primary Cells skin01 Skin
34 chr22:20780800-20782200 Strong transcription Duodenum Smooth Muscle Duodenum
35 chr22:20780800-20783000 Weak transcription Gastric stomach
36 chr22:20780800-20783200 Weak transcription Fetal Heart heart
37 chr22:20780800-20783200 Strong transcription Fetal Muscle Trunk muscle
38 chr22:20780800-20783200 Weak transcription Pancreas Pancrea
39 chr22:20780800-20783400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
40 chr22:20780800-20783400 Strong transcription HSMMtube muscle
41 chr22:20780800-20783800 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
42 chr22:20780800-20783800 Weak transcription Placenta Amnion Placenta Amnion
43 chr22:20780800-20783800 Strong transcription NH-A brain
44 chr22:20780800-20785000 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
45 chr22:20780800-20785000 Strong transcription Right Atrium heart
46 chr22:20781000-20783000 Weak transcription Esophagus oesophagus
47 chr22:20781000-20783200 Strong transcription Right Ventricle heart
48 chr22:20781200-20782000 Strong transcription Brain Anterior Caudate brain
49 chr22:20781200-20782200 Strong transcription H9 Cell Line embryonic stem cell
50 chr22:20781200-20783800 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived

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