The 2.0 version of rSNPBase

Variant report

Variant rs576009685
Chromosome Location chr16:81982416-81982417
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:41 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr16:81925800-81992600 Weak transcription Sigmoid Colon Sigmoid Colon
2 chr16:81933000-81983600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
3 chr16:81936000-81984600 Strong transcription Primary monocytes fromperipheralblood blood
4 chr16:81945000-81984600 Weak transcription Rectal Mucosa Donor 31 rectum
5 chr16:81946200-81985200 Weak transcription Rectal Smooth Muscle rectum
6 chr16:81952000-81982800 Strong transcription Primary B cells from peripheral blood blood
7 chr16:81952400-81983000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
8 chr16:81952800-81984600 Strong transcription Liver Liver
9 chr16:81954800-81991800 Weak transcription Fetal Thymus thymus
10 chr16:81959600-81983800 Strong transcription Primary hematopoietic stem cells short term culture blood
11 chr16:81961600-81984600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
12 chr16:81962600-81995800 Weak transcription Small Intestine intestine
13 chr16:81962800-81983600 Weak transcription Primary T cells fromperipheralblood blood
14 chr16:81963000-81984600 Strong transcription Primary Natural Killer cells fromperipheralblood blood
15 chr16:81963600-81983200 Strong transcription Primary neutrophils fromperipheralblood blood
16 chr16:81967400-81984600 Weak transcription Placenta Placenta
17 chr16:81968200-81984200 Strong transcription Primary hematopoietic stem cells blood
18 chr16:81970200-81990800 Weak transcription Pancreas Pancrea
19 chr16:81970800-81991200 Weak transcription Thymus Thymus
20 chr16:81970800-81994600 Weak transcription Fetal Intestine Large intestine
21 chr16:81971600-81984600 Weak transcription Left Ventricle heart
22 chr16:81972200-81993200 Weak transcription Fetal Kidney kidney
23 chr16:81973200-81984600 Weak transcription Fetal Intestine Small intestine
24 chr16:81975600-81983200 Strong transcription Duodenum Mucosa Duodenum
25 chr16:81975600-81984800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
26 chr16:81976000-81983000 Strong transcription Adipose Nuclei Adipose
27 chr16:81976800-81984600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
28 chr16:81978200-81982800 Strong transcription Primary mononuclear cells fromperipheralblood Blood
29 chr16:81979400-81982600 Strong transcription Fetal Adrenal Gland Adrenal Gland
30 chr16:81979400-81982600 Strong transcription Rectal Mucosa Donor 29 rectum
31 chr16:81979600-81982600 Strong transcription Lung lung
32 chr16:81979800-81982800 Strong transcription Duodenum Smooth Muscle Duodenum
33 chr16:81981800-81985400 ZNF genes & repeats Primary B cells from cord blood blood
34 chr16:81982000-81982600 Strong transcription Gastric stomach
35 chr16:81982000-81983000 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
36 chr16:81982000-81985000 ZNF genes & repeats GM12878-XiMat blood
37 chr16:81982000-81985600 ZNF genes & repeats Monocytes-CD14+_RO01746 blood
38 chr16:81982000-81986800 ZNF genes & repeats Breast Myoepithelial Primary Cells Breast
39 chr16:81982200-81982600 Strong transcription Fetal Stomach stomach
40 chr16:81982200-81982600 ZNF genes & repeats Spleen Spleen
41 chr16:81982400-81987000 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --

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Last update: Aug 31, 2015