Variant report

Variant	rs576046795
Chromosome Location	chr2:191207598-191207599
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr2:191207151..191209417-chr2:191272894..191274824,2	MCF-7	breast:

Variant related genes	Relation type
ENSG00000151690	Chromatin interaction

Extended variants
information (count: 1 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3405665	chr2:191207532-191210080	Flanking Active TSS Weak transcription Active TSS Enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:62 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:191191600-191208000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
2	chr2:191198400-191207600	Weak transcription	NHLF	lung
3	chr2:191198600-191208000	Weak transcription	Aorta	Aorta
4	chr2:191198800-191208000	Weak transcription	Ovary	ovary
5	chr2:191199600-191207600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
6	chr2:191199600-191208000	Weak transcription	HMEC	breast
7	chr2:191200600-191208000	Weak transcription	Left Ventricle	heart
8	chr2:191204200-191208000	Enhancers	HepG2	liver
9	chr2:191205600-191207600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
10	chr2:191205600-191207600	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
11	chr2:191205800-191216200	Weak transcription	K562	blood
12	chr2:191206800-191208000	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
13	chr2:191206800-191208200	Enhancers	Small Intestine	intestine
14	chr2:191207000-191207800	Enhancers	Primary neutrophils fromperipheralblood	blood
15	chr2:191207200-191207600	Enhancers	Brain Angular Gyrus	brain
16	chr2:191207200-191207600	Enhancers	Brain Hippocampus Middle	brain
17	chr2:191207200-191207800	Enhancers	Hela-S3	cervix
18	chr2:191207200-191208000	Bivalent Enhancer	iPS-20b Cell Line	embryonic stem cell
19	chr2:191207200-191208000	Enhancers	Brain Substantia Nigra	brain
20	chr2:191207200-191208000	Enhancers	Fetal Intestine Small	intestine
21	chr2:191207200-191208000	Enhancers	Fetal Stomach	stomach
22	chr2:191207400-191207600	Enhancers	ES-WA7 Cell Line	embryonic stem cell
23	chr2:191207400-191207600	Enhancers	Breast Myoepithelial Primary Cells	Breast
24	chr2:191207400-191207600	Enhancers	Brain Cingulate Gyrus	brain
25	chr2:191207400-191207600	Enhancers	Brain Inferior Temporal Lobe	brain
26	chr2:191207400-191207600	Enhancers	Duodenum Mucosa	Duodenum
27	chr2:191207400-191207600	Active TSS	Stomach Smooth Muscle	stomach
28	chr2:191207400-191207800	Enhancers	H9 Cell Line	embryonic stem cell
29	chr2:191207400-191207800	Enhancers	Primary hematopoietic stem cells	blood
30	chr2:191207400-191207800	Enhancers	Colon Smooth Muscle	Colon
31	chr2:191207400-191207800	Enhancers	Lung	lung
32	chr2:191207400-191207800	Enhancers	Skeletal Muscle Male	skeletal muscle
33	chr2:191207400-191207800	Flanking Active TSS	Skeletal Muscle Female	skeletal muscle
34	chr2:191207400-191207800	Enhancers	A549	lung
35	chr2:191207400-191207800	Enhancers	Monocytes-CD14+_RO01746	blood
36	chr2:191207400-191208000	Active TSS	ES-I3 Cell Line	embryonic stem cell
37	chr2:191207400-191208000	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
38	chr2:191207400-191208000	Bivalent Enhancer	HUES48 Cell Line	embryonic stem cell
39	chr2:191207400-191208000	Bivalent Enhancer	HUES6 Cell Line	embryonic stem cell
40	chr2:191207400-191208000	Bivalent Enhancer	iPS-15b Cell Line	embryonic stem cell
41	chr2:191207400-191208000	Bivalent Enhancer	iPS-18 Cell Line	embryonic stem cell
42	chr2:191207400-191208000	Enhancers	Primary monocytes fromperipheralblood	blood
43	chr2:191207400-191208000	Enhancers	Primary T helper cells PMA-I stimulated	--
44	chr2:191207400-191208000	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
45	chr2:191207400-191208000	Enhancers	Liver	Liver
46	chr2:191207400-191208000	Flanking Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
47	chr2:191207400-191208000	Enhancers	Esophagus	oesophagus
48	chr2:191207400-191208000	Enhancers	Fetal Adrenal Gland	Adrenal Gland
49	chr2:191207400-191208000	Enhancers	Fetal Muscle Leg	muscle
50	chr2:191207400-191208000	Enhancers	Placenta	Placenta

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