The 2.0 version of rSNPBase

Variant report

Variant rs576071659
Chromosome Location chr18:25705214-25705215
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:46 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr18:25695400-25708400 Weak transcription ES-WA7 Cell Line embryonic stem cell
2 chr18:25695600-25706800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
3 chr18:25696200-25727800 Weak transcription HSMMtube muscle
4 chr18:25696600-25715800 Weak transcription HUVEC blood vessel
5 chr18:25697000-25705600 Weak transcription NHLF lung
6 chr18:25697000-25708200 Weak transcription HUES6 Cell Line embryonic stem cell
7 chr18:25697800-25715600 Weak transcription Dnd41 blood
8 chr18:25698200-25708000 Genic enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
9 chr18:25702000-25708400 Weak transcription Left Ventricle heart
10 chr18:25702000-25708400 Weak transcription Right Ventricle heart
11 chr18:25702000-25712000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
12 chr18:25703000-25705400 Enhancers Fetal Heart heart
13 chr18:25703200-25705600 Enhancers Cortex derived primary cultured neurospheres brain
14 chr18:25703200-25705800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
15 chr18:25703200-25707400 Enhancers Liver Liver
16 chr18:25703800-25705400 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
17 chr18:25703800-25706800 Weak transcription Right Atrium heart
18 chr18:25703800-25727600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
19 chr18:25703800-25730000 Weak transcription Aorta Aorta
20 chr18:25704000-25705400 Enhancers Muscle Satellite Cultured Cells --
21 chr18:25704000-25705400 Enhancers Brain Germinal Matrix brain
22 chr18:25704000-25705600 Enhancers Osteobl bone
23 chr18:25704000-25708000 Enhancers HepG2 liver
24 chr18:25704200-25705400 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
25 chr18:25704200-25708200 Weak transcription HUES64 Cell Line embryonic stem cell
26 chr18:25704800-25705800 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
27 chr18:25704800-25708400 Weak transcription HUES48 Cell Line embryonic stem cell
28 chr18:25704800-25710200 Weak transcription iPS-20b Cell Line embryonic stem cell
29 chr18:25705000-25705400 Enhancers Fetal Brain Male brain
30 chr18:25705000-25707800 Weak transcription Brain Angular Gyrus brain
31 chr18:25705000-25709800 Weak transcription Brain Substantia Nigra brain
32 chr18:25705000-25727800 Weak transcription Ovary ovary
33 chr18:25705200-25705400 Flanking Active TSS A549 lung
34 chr18:25705200-25705600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
35 chr18:25705200-25706200 Weak transcription Fetal Brain Female brain
36 chr18:25705200-25706600 Weak transcription NH-A brain
37 chr18:25705200-25707800 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
38 chr18:25705200-25708000 Weak transcription HSMM muscle
39 chr18:25705200-25708400 Weak transcription ES-I3 Cell Line embryonic stem cell
40 chr18:25705200-25708400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
41 chr18:25705200-25710000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
42 chr18:25705200-25710000 Weak transcription Brain Anterior Caudate brain
43 chr18:25705200-25710000 Weak transcription Brain Inferior Temporal Lobe brain
44 chr18:25705200-25710200 Weak transcription Brain Cingulate Gyrus brain
45 chr18:25705200-25710200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
46 chr18:25705200-25727400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell

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Last update: Aug 31, 2015