Variant report

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ZNF384	chr1:90999843-91000414	GM12878	blood:	n/a	n/a
2	WRNIP1	chr1:90999643-90999954	GM12878	blood:	n/a	n/a
3	CUX1	chr1:90999765-91000073	GM12878	blood:	n/a	n/a
4	EBF1	chr1:90999774-91000110	GM12878	blood:	n/a	chr1:90999826-90999835
5	TBL1XR1	chr1:90999785-90999966	GM12878	blood:	n/a	n/a
6	ZNF143	chr1:90999645-91000021	GM12878	blood:	n/a	n/a
7	EP300	chr1:90999729-91000209	GM12878	blood:	n/a	n/a
8	BATF	chr1:90999757-91000041	GM12878	blood:	n/a	n/a
9	USF2	chr1:90999737-90999861	GM12878	blood:	n/a	n/a
10	TBP	chr1:90999748-90999999	GM12878	blood:	n/a	n/a
11	STAT1	chr1:90999805-90999949	GM12878	blood:	n/a	n/a
12	BATF	chr1:90999637-91000094	GM12878	blood:	n/a	n/a
13	EBF1	chr1:90999709-91000072	GM12878	blood:	n/a	chr1:90999826-90999835
14	RUNX3	chr1:90999754-91000090	GM12878	blood:	n/a	n/a
15	BCL11A	chr1:90999704-91000065	GM12878	blood:	n/a	n/a
16	EBF1	chr1:90999564-91000971	GM12878	blood:	n/a	chr1:90999826-90999835
17	BHLHE40	chr1:90999609-91000116	GM12878	blood:	n/a	n/a
18	EP300	chr1:90999628-91000146	GM12878	blood:	n/a	n/a
19	RCOR1	chr1:90999681-91000068	GM12878	blood:	n/a	n/a
20	EP300	chr1:90999785-90999983	GM12878	blood:	n/a	n/a

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr1:90985250..90987906-chr1:90999609..91001292,2	K562	blood:

Variant related genes	Relation type
ENSG00000229201	TF binding region

rSNPs within LD-proxies of this variant (count:6)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3394726	chr1:90811671-91019675	Flanking Active TSS Weak transcription Enhancers Bivalent Enhancer ZNF genes & repeats Strong transcription Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
2	esv1811797	chr1:90819992-91008105	Enhancers Weak transcription Bivalent Enhancer Active TSS Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:90998400-91004200	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
2	chr1:90998600-91004400	Enhancers	Dnd41	blood
3	chr1:90998600-91017000	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
4	chr1:90999200-91000800	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
5	chr1:90999200-91001000	Enhancers	HUES64 Cell Line	embryonic stem cell
6	chr1:90999400-91001000	Enhancers	HUES48 Cell Line	embryonic stem cell
7	chr1:90999400-91001200	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
8	chr1:90999400-91001200	Enhancers	iPS-20b Cell Line	embryonic stem cell
9	chr1:90999600-91001200	Enhancers	iPS-18 Cell Line	embryonic stem cell
10	chr1:90999800-91000800	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived

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