Variant report

Variant rs576125605
Chromosome Location chr11:64489551-64489552
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:22 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:64480400-64489800 Enhancers Fetal Brain Male brain
2 chr11:64487000-64490600 Weak transcription K562 blood
3 chr11:64487800-64489800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr11:64488000-64489600 Flanking Active TSS Fetal Brain Female brain
5 chr11:64488000-64490000 Flanking Active TSS Brain Germinal Matrix brain
6 chr11:64488400-64489600 Bivalent/Poised TSS Ganglion Eminence derived primary cultured neurospheres brain
7 chr11:64488600-64490600 Weak transcription Spleen Spleen
8 chr11:64488600-64491200 Active TSS Brain Angular Gyrus brain
9 chr11:64488600-64491200 Active TSS Brain Inferior Temporal Lobe brain
10 chr11:64489000-64490000 Active TSS Brain Substantia Nigra brain
11 chr11:64489000-64491200 Active TSS Brain Anterior Caudate brain
12 chr11:64489200-64489800 Active TSS Brain Cingulate Gyrus brain
13 chr11:64489200-64490000 Flanking Bivalent TSS/Enh H9 Derived Neuron Cultured Cells ES cell derived
14 chr11:64489400-64489600 Bivalent Enhancer iPS-15b Cell Line embryonic stem cell
15 chr11:64489400-64489600 Bivalent Enhancer Cortex derived primary cultured neurospheres brain
16 chr11:64489400-64489800 Bivalent Enhancer iPS DF 19.11 Cell Line embryonic stem cell
17 chr11:64489400-64490000 Enhancers ES-UCSF4 Cell Line embryonic stem cell
18 chr11:64489400-64490000 Bivalent/Poised TSS Foreskin Fibroblast Primary Cells skin02 Skin
19 chr11:64489400-64490200 Flanking Bivalent TSS/Enh H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
20 chr11:64489400-64490200 Bivalent Enhancer Primary hematopoietic stem cells short term culture blood
21 chr11:64489400-64491000 Active TSS Brain Dorsolateral Prefrontal Cortex brain
22 chr11:64489400-64491200 Active TSS Brain Hippocampus Middle brain

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