Variant report

Variant	rs576177959
Chromosome Location	chr10:18630243-18630244
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 1 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1046458	chr10:18629603-18683860	Enhancers Weak transcription Active TSS Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers	TF binding region CpG island	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:28 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:18629200-18630400	Active TSS	IMR90 fetal lung fibroblasts Cell Line	lung
2	chr10:18629200-18630400	Active TSS	Aorta	Aorta
3	chr10:18629400-18630400	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
4	chr10:18629400-18630400	Flanking Active TSS	Cortex derived primary cultured neurospheres	brain
5	chr10:18629400-18630400	Active TSS	Brain Inferior Temporal Lobe	brain
6	chr10:18629400-18630400	Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
7	chr10:18629400-18630400	Active TSS	Rectal Mucosa Donor 29	rectum
8	chr10:18629400-18630400	Active TSS	Stomach Smooth Muscle	stomach
9	chr10:18629400-18631600	Active TSS	Left Ventricle	heart
10	chr10:18629400-18632600	Active TSS	Right Atrium	heart
11	chr10:18629400-18632800	Active TSS	Right Ventricle	heart
12	chr10:18629600-18630400	Flanking Active TSS	Brain Cingulate Gyrus	brain
13	chr10:18629600-18630600	Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
14	chr10:18629600-18633000	Active TSS	Fetal Heart	heart
15	chr10:18629800-18630400	Enhancers	Fetal Brain Male	brain
16	chr10:18629800-18630400	Flanking Active TSS	Pancreatic Islets	Pancreatic Islet
17	chr10:18630000-18633800	Weak transcription	Liver	Liver
18	chr10:18630000-18639200	Weak transcription	Pancreas	Pancrea
19	chr10:18630200-18630400	Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
20	chr10:18630200-18630400	Flanking Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
21	chr10:18630200-18630400	Enhancers	Colon Smooth Muscle	Colon
22	chr10:18630200-18630400	Enhancers	Duodenum Mucosa	Duodenum
23	chr10:18630200-18630400	Flanking Active TSS	Fetal Kidney	kidney
24	chr10:18630200-18630400	Enhancers	Fetal Stomach	stomach
25	chr10:18630200-18630400	Flanking Active TSS	Rectal Smooth Muscle	rectum
26	chr10:18630200-18630400	Enhancers	NH-A	brain
27	chr10:18630200-18630400	Active TSS	NHLF	lung
28	chr10:18630200-18639200	Weak transcription	Ovary	ovary

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