The 2.0 version of rSNPBase

Variant report

Variant rs576262091
Chromosome Location chr11:85969685-85969686
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:122 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:85957200-85972400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
2 chr11:85957200-85972400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
3 chr11:85957200-85972400 Weak transcription Esophagus oesophagus
4 chr11:85957200-85995400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr11:85957400-85985600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
6 chr11:85957400-86008000 Weak transcription Psoas Muscle Psoas
7 chr11:85957800-85997200 Weak transcription Colonic Mucosa Colon
8 chr11:85957800-85999800 Weak transcription Brain Cingulate Gyrus brain
9 chr11:85958400-85972400 Weak transcription Aorta Aorta
10 chr11:85958400-85997200 Weak transcription Brain Germinal Matrix brain
11 chr11:85959200-85974000 Weak transcription Muscle Satellite Cultured Cells --
12 chr11:85959200-85988000 Weak transcription Skeletal Muscle Male skeletal muscle
13 chr11:85959200-85988600 Weak transcription Brain Angular Gyrus brain
14 chr11:85959200-85997600 Weak transcription Colon Smooth Muscle Colon
15 chr11:85959400-85995000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
16 chr11:85960000-85970800 Weak transcription Fetal Brain Female brain
17 chr11:85960000-85972400 Weak transcription Pancreas Pancrea
18 chr11:85960200-85972800 Weak transcription Skeletal Muscle Female skeletal muscle
19 chr11:85960200-85985600 Weak transcription Gastric stomach
20 chr11:85960600-85972200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
21 chr11:85960800-85972400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
22 chr11:85960800-85988000 Weak transcription Fetal Heart heart
23 chr11:85961000-85972200 Weak transcription Ovary ovary
24 chr11:85961000-85972400 Weak transcription Right Ventricle heart
25 chr11:85961000-85996000 Strong transcription Monocytes-CD14+_RO01746 blood
26 chr11:85961000-85997000 Weak transcription Stomach Mucosa stomach
27 chr11:85961200-85972600 Weak transcription NHEK skin
28 chr11:85961400-85980600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
29 chr11:85961400-85985800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
30 chr11:85961600-85970600 Weak transcription A549 lung
31 chr11:85961600-85972400 Weak transcription Small Intestine intestine
32 chr11:85961600-85974400 Weak transcription ES-I3 Cell Line embryonic stem cell
33 chr11:85961600-85998000 Weak transcription Primary T killer memory cells from peripheral blood blood
34 chr11:85961800-85972400 Weak transcription NHLF lung
35 chr11:85961800-85988000 Weak transcription Brain Substantia Nigra brain
36 chr11:85962800-85972400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
37 chr11:85962800-85975200 Weak transcription NHDF-Ad bronchial
38 chr11:85963000-85984400 Weak transcription Pancreatic Islets Pancreatic Islet
39 chr11:85963800-85970800 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
40 chr11:85964000-85972400 Weak transcription Lung lung
41 chr11:85964000-85995000 Weak transcription H9 Cell Line embryonic stem cell
42 chr11:85964200-85972400 Weak transcription Spleen Spleen
43 chr11:85964400-85980000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
44 chr11:85964400-85987600 Weak transcription Primary T helper naive cells from peripheral blood blood
45 chr11:85965800-85975400 Strong transcription Primary T cells fromperipheralblood blood
46 chr11:85965800-85976400 Strong transcription Breast Myoepithelial Primary Cells Breast
47 chr11:85966000-85992000 Strong transcription Primary Natural Killer cells fromperipheralblood blood
48 chr11:85966200-85971200 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
49 chr11:85966200-85971800 Strong transcription Primary B cells from peripheral blood blood
50 chr11:85966200-85976200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --

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Last update: Aug 31, 2015