Variant report

Variant	rs576315208
Chromosome Location	chr6:82725379-82725380
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:82724785..82726796-chr6:82728771..82731577,2	K562	blood:
2	chr6:82725024..82725524-chr8:107278617..107279120,2	MCF-7	breast:

Extended variants
information (count: 4 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1020783	chr6:82720632-82732325	Enhancers Flanking Active TSS Weak transcription Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
2	nsv1021793	chr6:82720632-82737456	Enhancers Flanking Active TSS Weak transcription Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
3	nsv1034389	chr6:82721569-82746599	Enhancers Bivalent Enhancer Weak transcription Flanking Active TSS Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
4	nsv1020964	chr6:82725168-82737456	Enhancers Weak transcription Flanking Active TSS Active TSS	Chromatin interactive region	n/a	inside rSNPs	n/a

No data

Chromatin state (count:39 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:82721600-82727600	Enhancers	HUVEC	blood vessel
2	chr6:82722400-82728200	Enhancers	Hela-S3	cervix
3	chr6:82722600-82725400	Enhancers	Aorta	Aorta
4	chr6:82722800-82727600	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
5	chr6:82722800-82728000	Enhancers	Fetal Adrenal Gland	Adrenal Gland
6	chr6:82723000-82727800	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
7	chr6:82723000-82728400	Enhancers	HMEC	breast
8	chr6:82723200-82725400	Enhancers	NH-A	brain
9	chr6:82723200-82725800	Enhancers	NHEK	skin
10	chr6:82723200-82726200	Weak transcription	Stomach Smooth Muscle	stomach
11	chr6:82723400-82725800	Enhancers	Osteobl	bone
12	chr6:82723600-82725600	Enhancers	Ovary	ovary
13	chr6:82723600-82726400	Weak transcription	Duodenum Smooth Muscle	Duodenum
14	chr6:82723600-82727800	Enhancers	HSMM	muscle
15	chr6:82723800-82726600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
16	chr6:82723800-82727000	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
17	chr6:82724000-82726400	Weak transcription	HSMMtube	muscle
18	chr6:82724000-82728000	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
19	chr6:82724200-82727800	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
20	chr6:82724400-82725400	Enhancers	Primary hematopoietic stem cells short term culture	blood
21	chr6:82724600-82725600	Flanking Active TSS	Muscle Satellite Cultured Cells	--
22	chr6:82724600-82725600	Weak transcription	Pancreatic Islets	Pancreatic Islet
23	chr6:82724600-82726200	Weak transcription	Right Ventricle	heart
24	chr6:82724800-82725400	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
25	chr6:82724800-82726000	Weak transcription	Right Atrium	heart
26	chr6:82724800-82726200	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
27	chr6:82725000-82726000	Weak transcription	Adipose Nuclei	Adipose
28	chr6:82725000-82726000	Weak transcription	Skeletal Muscle Male	skeletal muscle
29	chr6:82725000-82726200	Weak transcription	Skeletal Muscle Female	skeletal muscle
30	chr6:82725000-82726800	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
31	chr6:82725000-82726800	Weak transcription	Placenta Amnion	Placenta Amnion
32	chr6:82725000-82727400	Enhancers	HepG2	liver
33	chr6:82725000-82728200	Weak transcription	Psoas Muscle	Psoas
34	chr6:82725200-82725400	Flanking Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
35	chr6:82725200-82725400	Flanking Active TSS	NHDF-Ad	bronchial
36	chr6:82725200-82725600	Flanking Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
37	chr6:82725200-82726000	Enhancers	Liver	Liver
38	chr6:82725200-82726800	Weak transcription	NHLF	lung
39	chr6:82725200-82731600	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin

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