The 2.0 version of rSNPBase

Variant report

Variant rs576405176
Chromosome Location chr2:58656054-58656055
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:87 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:58654400-58656200 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
2 chr2:58654400-58656200 Active TSS Fetal Stomach stomach
3 chr2:58654400-58656400 Active TSS H1 Cell Line embryonic stem cell
4 chr2:58654400-58656400 Active TSS Fetal Brain Female brain
5 chr2:58654400-58656600 Active TSS NH-A brain
6 chr2:58654400-58657000 Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
7 chr2:58654600-58656200 Active TSS H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
8 chr2:58654600-58656200 Active TSS ES-UCSF4 Cell Line embryonic stem cell
9 chr2:58654600-58656200 Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
10 chr2:58654600-58656200 Active TSS Brain Inferior Temporal Lobe brain
11 chr2:58654600-58656200 Active TSS Duodenum Mucosa Duodenum
12 chr2:58654600-58656400 Active TSS ES-I3 Cell Line embryonic stem cell
13 chr2:58654600-58656400 Active TSS H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
14 chr2:58654600-58656400 Active TSS iPS DF 6.9 Cell Line embryonic stem cell
15 chr2:58654600-58656400 Bivalent/Poised TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
16 chr2:58654600-58656400 Active TSS Breast Myoepithelial Primary Cells Breast
17 chr2:58654600-58656400 Active TSS Ovary ovary
18 chr2:58654600-58656600 Active TSS H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
19 chr2:58654600-58656600 Active TSS H9 Cell Line embryonic stem cell
20 chr2:58654600-58656800 Active TSS ES-WA7 Cell Line embryonic stem cell
21 chr2:58654800-58656200 Active TSS HUES48 Cell Line embryonic stem cell
22 chr2:58654800-58656200 Active TSS HUES6 Cell Line embryonic stem cell
23 chr2:58654800-58656200 Active TSS Ganglion Eminence derived primary cultured neurospheres brain
24 chr2:58654800-58656200 Bivalent/Poised TSS Esophagus oesophagus
25 chr2:58654800-58656200 Active TSS Fetal Intestine Small intestine
26 chr2:58654800-58656200 Active TSS Pancreatic Islets Pancreatic Islet
27 chr2:58654800-58656200 Active TSS Pancreas Pancrea
28 chr2:58654800-58656200 Active TSS Rectal Smooth Muscle rectum
29 chr2:58654800-58656200 Active TSS HSMM muscle
30 chr2:58654800-58656200 Bivalent/Poised TSS HSMMtube muscle
31 chr2:58654800-58656200 Active TSS NHDF-Ad bronchial
32 chr2:58654800-58656400 Active TSS HUES64 Cell Line embryonic stem cell
33 chr2:58654800-58656400 Active TSS iPS-15b Cell Line embryonic stem cell
34 chr2:58654800-58656400 Active TSS iPS-20b Cell Line embryonic stem cell
35 chr2:58654800-58656400 Active TSS Brain Substantia Nigra brain
36 chr2:58654800-58656400 Active TSS Fetal Kidney kidney
37 chr2:58654800-58656600 Active TSS iPS-18 Cell Line embryonic stem cell
38 chr2:58654800-58656600 Active TSS iPS DF 19.11 Cell Line embryonic stem cell
39 chr2:58654800-58656600 Active TSS Brain Angular Gyrus brain
40 chr2:58654800-58656600 Active TSS Brain Dorsolateral Prefrontal Cortex brain
41 chr2:58654800-58656800 Active TSS Brain Hippocampus Middle brain
42 chr2:58654800-58657000 Active TSS Brain Germinal Matrix brain
43 chr2:58655000-58656200 Active TSS Fetal Muscle Leg muscle
44 chr2:58655000-58656200 Active TSS A549 lung
45 chr2:58655000-58656400 Active TSS Right Ventricle heart
46 chr2:58655000-58656600 Active TSS Fetal Brain Male brain
47 chr2:58655000-58656800 Active TSS Brain Cingulate Gyrus brain
48 chr2:58655200-58656200 Active TSS H9 Derived Neuron Cultured Cells ES cell derived
49 chr2:58655200-58656200 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
50 chr2:58655200-58656200 Enhancers Adipose Nuclei Adipose

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Last update: Aug 31, 2015