The 2.0 version of rSNPBase

Variant report

Variant rs576428466
Chromosome Location chr10:89918656-89918657
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:51 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:89909200-89919200 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
2 chr10:89909200-89919200 Enhancers NHDF-Ad bronchial
3 chr10:89909400-89919200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
4 chr10:89912800-89918800 Weak transcription Skeletal Muscle Female skeletal muscle
5 chr10:89912800-89925000 Weak transcription Left Ventricle heart
6 chr10:89913000-89924400 Weak transcription Right Atrium heart
7 chr10:89914000-89919200 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
8 chr10:89914800-89918800 Enhancers Osteobl bone
9 chr10:89915200-89929600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
10 chr10:89915800-89919200 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
11 chr10:89915800-89919200 Enhancers HSMM muscle
12 chr10:89915800-89919200 Enhancers HUVEC blood vessel
13 chr10:89915800-89919200 Enhancers NH-A brain
14 chr10:89916000-89919200 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
15 chr10:89916000-89919200 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
16 chr10:89916000-89919200 Enhancers HMEC breast
17 chr10:89916200-89919200 Enhancers NHEK skin
18 chr10:89916600-89919800 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
19 chr10:89917200-89918800 Enhancers Colon Smooth Muscle Colon
20 chr10:89917200-89919000 Enhancers Adipose Nuclei Adipose
21 chr10:89917200-89919000 Enhancers A549 lung
22 chr10:89917200-89919200 Enhancers Breast Myoepithelial Primary Cells Breast
23 chr10:89917200-89919200 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
24 chr10:89917200-89919200 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
25 chr10:89917200-89919200 Enhancers Fetal Stomach stomach
26 chr10:89917200-89919200 Enhancers Rectal Mucosa Donor 31 rectum
27 chr10:89917400-89918800 Enhancers Rectal Smooth Muscle rectum
28 chr10:89917400-89918800 Enhancers HSMMtube muscle
29 chr10:89917400-89919000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
30 chr10:89917400-89919000 Enhancers Fetal Intestine Small intestine
31 chr10:89917400-89919200 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
32 chr10:89917400-89919200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
33 chr10:89917400-89919200 Enhancers Primary monocytes fromperipheralblood blood
34 chr10:89917400-89919200 Enhancers Fetal Adrenal Gland Adrenal Gland
35 chr10:89917400-89919200 Enhancers Fetal Lung lung
36 chr10:89917400-89919200 Enhancers Placenta Amnion Placenta Amnion
37 chr10:89917600-89919200 Enhancers Primary hematopoietic stem cells short term culture blood
38 chr10:89917800-89918800 Weak transcription Duodenum Smooth Muscle Duodenum
39 chr10:89917800-89918800 Weak transcription Ovary ovary
40 chr10:89917800-89918800 Weak transcription Sigmoid Colon Sigmoid Colon
41 chr10:89918000-89919000 Weak transcription Dnd41 blood
42 chr10:89918000-89919200 Enhancers Small Intestine intestine
43 chr10:89918200-89920400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
44 chr10:89918200-89937600 Weak transcription Aorta Aorta
45 chr10:89918400-89919000 Enhancers Rectal Mucosa Donor 29 rectum
46 chr10:89918400-89922200 Weak transcription Monocytes-CD14+_RO01746 blood
47 chr10:89918400-89925600 Weak transcription Skeletal Muscle Male skeletal muscle
48 chr10:89918600-89919200 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
49 chr10:89918600-89919200 Enhancers Muscle Satellite Cultured Cells --
50 chr10:89918600-89919200 Flanking Active TSS Hela-S3 cervix

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015