Variant report

Variant	rs576428668
Chromosome Location	chr20:21850049-21850050
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 26 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:26 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1058137	chr20:21549350-22295051	Weak transcription Bivalent Enhancer Active TSS Enhancers Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	17 gene(s)	inside rSNPs	diseases
2	nsv912814	chr20:21703615-21946928	Enhancers Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Active TSS Weak transcription ZNF genes & repeats Bivalent/Poised TSS	TF binding region Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
3	esv1792519	chr20:21847931-21867288	Weak transcription Enhancers Bivalent Enhancer ZNF genes & repeats	n/a	n/a	inside rSNPs	n/a
4	esv2573409	chr20:21849388-21850930	Weak transcription Enhancers Bivalent Enhancer	n/a	n/a	inside rSNPs	n/a
5	esv2122227	chr20:21849717-21850377	Weak transcription Enhancers	n/a	n/a	inside rSNPs	n/a
6	esv7978	chr20:21849738-21850360	Enhancers Weak transcription	n/a	n/a	inside rSNPs	n/a
7	esv3454205	chr20:21849769-21850293	Enhancers Weak transcription	n/a	n/a	inside rSNPs	n/a
8	esv3525968	chr20:21849799-21850298	Enhancers Weak transcription	n/a	n/a	inside rSNPs	n/a
9	esv3525965	chr20:21849805-21850271	Enhancers Weak transcription	n/a	n/a	inside rSNPs	n/a
10	esv3525966	chr20:21849817-21850222	Weak transcription Enhancers	n/a	n/a	inside rSNPs	n/a
11	esv3454206	chr20:21849820-21850257	Weak transcription Enhancers	n/a	n/a	inside rSNPs	n/a
12	esv3454207	chr20:21849822-21850260	Enhancers Weak transcription	n/a	n/a	inside rSNPs	n/a
13	esv3454204	chr20:21849837-21850213	Enhancers Weak transcription	n/a	n/a	inside rSNPs	n/a
14	esv3525967	chr20:21849845-21850240	Weak transcription Enhancers	n/a	n/a	inside rSNPs	n/a
15	esv3525969	chr20:21849847-21850237	Weak transcription Enhancers	n/a	n/a	inside rSNPs	n/a
16	esv2820	chr20:21849853-21850275	Enhancers Weak transcription	n/a	n/a	inside rSNPs	n/a
17	esv3444255	chr20:21849865-21850210	Weak transcription Enhancers	n/a	n/a	inside rSNPs	n/a
18	esv3454203	chr20:21849889-21850194	Enhancers Weak transcription	n/a	n/a	inside rSNPs	n/a
19	esv3525964	chr20:21849901-21850189	Weak transcription Enhancers	n/a	n/a	inside rSNPs	n/a
20	esv994774	chr20:21849903-21850189	Enhancers Weak transcription	n/a	n/a	inside rSNPs	n/a
21	esv2456942	chr20:21849903-21850189	Enhancers Weak transcription	n/a	n/a	inside rSNPs	n/a
22	nsv179603	chr20:21849903-21850189	Enhancers Weak transcription	n/a	n/a	inside rSNPs	n/a
23	esv1676896	chr20:21849903-21850190	Enhancers Weak transcription	n/a	n/a	inside rSNPs	n/a
24	esv3454209	chr20:21849903-21850191	Weak transcription Enhancers	n/a	n/a	inside rSNPs	n/a
25	esv3525970	chr20:21849903-21850191	Enhancers Weak transcription	n/a	n/a	inside rSNPs	n/a
26	nsv179469	chr20:21849904-21850190	Weak transcription Enhancers	n/a	n/a	inside rSNPs	n/a

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr20:21846000-21854000	Weak transcription	Fetal Muscle Leg	muscle
2	chr20:21849000-21851800	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

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