Variant report

Variant	rs576442541
Chromosome Location	chr7:137927606-137927607
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr7:137854218..137856013-chr7:137925326..137928137,2	MCF-7	breast:
2	chr7:137926916..137928434-chr7:137998152..138000341,2	K562	blood:
3	chr7:137927382..137930242-chr7:137937479..137939560,2	MCF-7	breast:

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv34048	chr7:137724092-138213119	Enhancers ZNF genes & repeats Flanking Active TSS Weak transcription Strong transcription Active TSS Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA	35 gene(s)	inside rSNPs	diseases
2	nsv831152	chr7:137884311-138033117	Flanking Active TSS Enhancers Active TSS Weak transcription ZNF genes & repeats Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
3	esv3439287	chr7:137926912-137931110	Enhancers Weak transcription Flanking Active TSS Active TSS	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:22 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:137905800-137928600	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
2	chr7:137915000-137931800	Weak transcription	Right Atrium	heart
3	chr7:137921800-137929400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
4	chr7:137924200-137928400	Weak transcription	H1 Cell Line	embryonic stem cell
5	chr7:137924400-137927800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
6	chr7:137924600-137928200	Weak transcription	Monocytes-CD14+_RO01746	blood
7	chr7:137924600-137929400	Weak transcription	Primary monocytes fromperipheralblood	blood
8	chr7:137927400-137927800	Enhancers	HUES64 Cell Line	embryonic stem cell
9	chr7:137927400-137927800	Active TSS	Liver	Liver
10	chr7:137927400-137928600	Active TSS	H9 Derived Neuron Cultured Cells	ES cell derived
11	chr7:137927400-137929400	Weak transcription	Ovary	ovary
12	chr7:137927400-137930000	Enhancers	Cortex derived primary cultured neurospheres	brain
13	chr7:137927600-137927800	Enhancers	iPS-20b Cell Line	embryonic stem cell
14	chr7:137927600-137927800	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
15	chr7:137927600-137928000	Flanking Active TSS	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
16	chr7:137927600-137928000	Enhancers	HUES48 Cell Line	embryonic stem cell
17	chr7:137927600-137928000	Enhancers	HUES6 Cell Line	embryonic stem cell
18	chr7:137927600-137928000	Enhancers	iPS-18 Cell Line	embryonic stem cell
19	chr7:137927600-137928000	Flanking Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
20	chr7:137927600-137928400	Flanking Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
21	chr7:137927600-137932000	Enhancers	HepG2	liver
22	chr7:137927600-137933200	Enhancers	iPS-15b Cell Line	embryonic stem cell

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