Variant report

Variant rs576497840
Chromosome Location chr18:8949957-8949958
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:42 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr18:8947600-8950200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
2 chr18:8947600-8950400 Enhancers ES-UCSF4 Cell Line embryonic stem cell
3 chr18:8947600-8950400 Enhancers Fetal Brain Male brain
4 chr18:8947800-8950000 Enhancers H1 Cell Line embryonic stem cell
5 chr18:8947800-8950000 Enhancers iPS-18 Cell Line embryonic stem cell
6 chr18:8947800-8950200 Enhancers iPS-15b Cell Line embryonic stem cell
7 chr18:8947800-8950400 Enhancers Placenta Amnion Placenta Amnion
8 chr18:8947800-8952400 Enhancers Fetal Thymus thymus
9 chr18:8947800-8955000 Enhancers Primary B cells from peripheral blood blood
10 chr18:8948000-8950000 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
11 chr18:8948000-8954200 Enhancers Primary B cells from cord blood blood
12 chr18:8948200-8950000 Flanking Active TSS NHEK skin
13 chr18:8948400-8950000 Enhancers Brain Germinal Matrix brain
14 chr18:8948400-8950200 Enhancers HUES64 Cell Line embryonic stem cell
15 chr18:8948400-8955600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
16 chr18:8949200-8950200 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
17 chr18:8949200-8953200 Enhancers Dnd41 blood
18 chr18:8949400-8950000 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
19 chr18:8949400-8950000 Enhancers A549 lung
20 chr18:8949400-8950400 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
21 chr18:8949400-8950600 Enhancers ES-I3 Cell Line embryonic stem cell
22 chr18:8949400-8952200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
23 chr18:8949400-8952600 Enhancers K562 blood
24 chr18:8949400-8952600 Weak transcription Osteobl bone
25 chr18:8949600-8950000 Enhancers Rectal Smooth Muscle rectum
26 chr18:8949600-8950000 Enhancers HSMMtube muscle
27 chr18:8949600-8950200 Enhancers HMEC breast
28 chr18:8949600-8950200 Enhancers HSMM muscle
29 chr18:8949600-8950400 Enhancers Fetal Brain Female brain
30 chr18:8949800-8950000 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
31 chr18:8949800-8950000 Flanking Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
32 chr18:8949800-8950400 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
33 chr18:8949800-8950600 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
34 chr18:8949800-8950600 Enhancers NHLF lung
35 chr18:8949800-8951600 Weak transcription NH-A brain
36 chr18:8949800-8951800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
37 chr18:8949800-8952200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
38 chr18:8949800-8952200 Weak transcription Muscle Satellite Cultured Cells --
39 chr18:8949800-8953800 Enhancers NHDF-Ad bronchial
40 chr18:8949800-8959000 Weak transcription H9 Cell Line embryonic stem cell
41 chr18:8949800-8959000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
42 chr18:8949800-8962200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell

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