Variant report

Variant	rs576512556
Chromosome Location	chr10:95966871-95966872
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1036676	chr10:95851376-96103876	Strong transcription Enhancers Weak transcription ZNF genes & repeats Bivalent Enhancer Active TSS Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases
2	esv2761616	chr10:95966768-96303701	Enhancers Strong transcription Flanking Active TSS ZNF genes & repeats Active TSS Genic enhancers Weak transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	14 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:41 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:95932600-95968000	Weak transcription	Breast Myoepithelial Primary Cells	Breast
2	chr10:95933000-95972600	Weak transcription	Fetal Intestine Large	intestine
3	chr10:95941200-95979800	Weak transcription	Rectal Mucosa Donor 31	rectum
4	chr10:95943400-95973800	Weak transcription	Rectal Mucosa Donor 29	rectum
5	chr10:95959600-95972400	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
6	chr10:95959800-95970600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
7	chr10:95959800-95972800	Weak transcription	A549	lung
8	chr10:95960000-95991800	Weak transcription	Duodenum Mucosa	Duodenum
9	chr10:95960600-95970200	Weak transcription	Fetal Muscle Trunk	muscle
10	chr10:95960800-95970800	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
11	chr10:95962600-95973600	Weak transcription	Cortex derived primary cultured neurospheres	brain
12	chr10:95964600-95967000	Enhancers	Fetal Lung	lung
13	chr10:95964600-95967000	Enhancers	Skeletal Muscle Female	skeletal muscle
14	chr10:95964800-95967000	Enhancers	Liver	Liver
15	chr10:95965200-95967000	Enhancers	Skeletal Muscle Male	skeletal muscle
16	chr10:95965200-95972600	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
17	chr10:95965400-95967000	Enhancers	Lung	lung
18	chr10:95965400-95967000	Enhancers	Right Atrium	heart
19	chr10:95965400-95967000	Enhancers	Spleen	Spleen
20	chr10:95965600-95967200	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
21	chr10:95965600-95969600	Weak transcription	HSMMtube	muscle
22	chr10:95965800-95967600	ZNF genes & repeats	Fetal Intestine Small	intestine
23	chr10:95965800-95968000	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
24	chr10:95965800-95968000	Weak transcription	Ovary	ovary
25	chr10:95965800-95969600	Weak transcription	Fetal Kidney	kidney
26	chr10:95965800-95969600	Weak transcription	Stomach Smooth Muscle	stomach
27	chr10:95965800-95970400	Weak transcription	Aorta	Aorta
28	chr10:95965800-95972800	Weak transcription	Colon Smooth Muscle	Colon
29	chr10:95966000-95967000	Enhancers	Small Intestine	intestine
30	chr10:95966200-95967000	Enhancers	Primary T cells fromperipheralblood	blood
31	chr10:95966200-95967000	Enhancers	GM12878-XiMat	blood
32	chr10:95966200-95970600	Weak transcription	Duodenum Smooth Muscle	Duodenum
33	chr10:95966400-95967400	Weak transcription	Right Ventricle	heart
34	chr10:95966400-95970200	Weak transcription	Psoas Muscle	Psoas
35	chr10:95966600-95969600	Weak transcription	Adipose Nuclei	Adipose
36	chr10:95966600-95987000	Weak transcription	Sigmoid Colon	Sigmoid Colon
37	chr10:95966800-95967000	Flanking Active TSS	Foreskin Fibroblast Primary Cells skin02	Skin
38	chr10:95966800-95967000	ZNF genes & repeats	Fetal Stomach	stomach
39	chr10:95966800-95967200	Enhancers	Pancreas	Pancrea
40	chr10:95966800-95967400	ZNF genes & repeats	Ganglion Eminence derived primary cultured neurospheres	brain
41	chr10:95966800-95967600	ZNF genes & repeats	Fetal Muscle Leg	muscle

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