Variant report

Variant rs57683399
Chromosome Location chr5:112468557-112468558
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:26 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:112451000-112478800 Weak transcription Aorta Aorta
2 chr5:112458400-112474200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
3 chr5:112458600-112474000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
4 chr5:112458600-112477000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
5 chr5:112458800-112476600 Weak transcription NHEK skin
6 chr5:112461200-112469400 Weak transcription Pancreatic Islets Pancreatic Islet
7 chr5:112461400-112476800 Weak transcription Fetal Muscle Leg muscle
8 chr5:112461800-112476200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
9 chr5:112462200-112475600 Weak transcription Liver Liver
10 chr5:112462600-112476200 Weak transcription Cortex derived primary cultured neurospheres brain
11 chr5:112464800-112470000 Weak transcription Fetal Brain Female brain
12 chr5:112464800-112476800 Weak transcription HUES48 Cell Line embryonic stem cell
13 chr5:112465200-112476200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
14 chr5:112466600-112468600 Enhancers Fetal Heart heart
15 chr5:112467400-112468600 Weak transcription Fetal Brain Male brain
16 chr5:112467400-112475800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
17 chr5:112467400-112476200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
18 chr5:112467400-112493200 Weak transcription Fetal Muscle Trunk muscle
19 chr5:112467600-112476400 Weak transcription Left Ventricle heart
20 chr5:112467600-112476400 Weak transcription Right Atrium heart
21 chr5:112467800-112476800 Weak transcription iPS-15b Cell Line embryonic stem cell
22 chr5:112468200-112469200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
23 chr5:112468200-112476600 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
24 chr5:112468400-112468600 Enhancers Ovary ovary
25 chr5:112468400-112468600 Enhancers Psoas Muscle Psoas
26 chr5:112468400-112468600 Enhancers NHDF-Ad bronchial

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