Variant report

Variant	rs576834686
Chromosome Location	chr7:14543403-14543404
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 7 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:7 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv949033	chr7:14086106-14860323	Enhancers Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats Strong transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
2	nsv915603	chr7:14443884-14624268	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
3	esv1848567	chr7:14464118-14579801	Enhancers Active TSS Flanking Active TSS Weak transcription ZNF genes & repeats	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
4	nsv887707	chr7:14471682-14576163	Enhancers Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
5	nsv887708	chr7:14494508-14617982	Active TSS Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
6	esv1800100	chr7:14511454-14564068	Weak transcription Enhancers Active TSS ZNF genes & repeats Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
7	nsv606282	chr7:14542836-14579801	Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:15 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:14542400-14543600	Enhancers	Brain Germinal Matrix	brain
2	chr7:14542400-14544800	Enhancers	iPS-18 Cell Line	embryonic stem cell
3	chr7:14542400-14545400	Enhancers	Cortex derived primary cultured neurospheres	brain
4	chr7:14542400-14545600	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
5	chr7:14542600-14545000	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
6	chr7:14543000-14544200	Enhancers	HUES64 Cell Line	embryonic stem cell
7	chr7:14543200-14544200	Enhancers	Brain Angular Gyrus	brain
8	chr7:14543200-14544800	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
9	chr7:14543400-14543800	Enhancers	iPS-15b Cell Line	embryonic stem cell
10	chr7:14543400-14543800	Enhancers	Brain Inferior Temporal Lobe	brain
11	chr7:14543400-14544200	Enhancers	ES-I3 Cell Line	embryonic stem cell
12	chr7:14543400-14544200	Enhancers	Brain Hippocampus Middle	brain
13	chr7:14543400-14544200	Enhancers	Brain Substantia Nigra	brain
14	chr7:14543400-14544400	Enhancers	iPS-20b Cell Line	embryonic stem cell
15	chr7:14543400-14544800	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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