Variant report

Variant	rs576914515
Chromosome Location	chr7:123830968-123830969
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 5 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv608338	chr7:123787673-124063498	Enhancers ZNF genes & repeats Active TSS Bivalent Enhancer Weak transcription Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
2	nsv1019824	chr7:123817167-123926854	Weak transcription Enhancers ZNF genes & repeats Bivalent Enhancer Active TSS Flanking Active TSS	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
3	nsv1016498	chr7:123829760-123954337	Weak transcription Enhancers Bivalent Enhancer ZNF genes & repeats Active TSS Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
4	nsv539109	chr7:123829760-123954337	Enhancers Weak transcription Active TSS Bivalent Enhancer Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
5	esv1818748	chr7:123829886-124039708	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:123828000-123832400	Enhancers	Fetal Heart	heart
2	chr7:123828200-123832000	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
3	chr7:123829200-123831000	Weak transcription	iPS-18 Cell Line	embryonic stem cell
4	chr7:123829400-123831000	Weak transcription	iPS-15b Cell Line	embryonic stem cell
5	chr7:123829800-123831000	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
6	chr7:123830200-123831000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
7	chr7:123830800-123831400	Enhancers	HUES64 Cell Line	embryonic stem cell
8	chr7:123830800-123831600	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
9	chr7:123830800-123831600	Enhancers	Brain Cingulate Gyrus	brain
10	chr7:123830800-123842200	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links