Variant report

Variant rs576923430
Chromosome Location chr14:105330587-105330588
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:78 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr14:105311000-105330600 Weak transcription Right Atrium heart
2 chr14:105324000-105330800 Weak transcription Brain Substantia Nigra brain
3 chr14:105329600-105330600 Weak transcription Brain Hippocampus Middle brain
4 chr14:105329800-105330600 Flanking Active TSS iPS DF 19.11 Cell Line embryonic stem cell
5 chr14:105329800-105330600 Flanking Active TSS Breast Myoepithelial Primary Cells Breast
6 chr14:105329800-105330600 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
7 chr14:105329800-105330600 Bivalent/Poised TSS Fetal Stomach stomach
8 chr14:105329800-105330800 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
9 chr14:105329800-105331200 Bivalent/Poised TSS HUES6 Cell Line embryonic stem cell
10 chr14:105329800-105331200 Bivalent/Poised TSS iPS-18 Cell Line embryonic stem cell
11 chr14:105329800-105331200 Bivalent/Poised TSS iPS-20b Cell Line embryonic stem cell
12 chr14:105329800-105331200 Bivalent/Poised TSS Fetal Intestine Large intestine
13 chr14:105329800-105332600 Active TSS Gastric stomach
14 chr14:105329800-105333200 Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
15 chr14:105330000-105330600 Active TSS Rectal Mucosa Donor 29 rectum
16 chr14:105330000-105331200 Bivalent/Poised TSS Sigmoid Colon Sigmoid Colon
17 chr14:105330000-105331200 Active TSS Stomach Mucosa stomach
18 chr14:105330000-105332400 Active TSS Duodenum Mucosa Duodenum
19 chr14:105330000-105332600 Active TSS Rectal Mucosa Donor 31 rectum
20 chr14:105330000-105332600 Active TSS HMEC breast
21 chr14:105330000-105332800 Active TSS NHEK skin
22 chr14:105330000-105333200 Bivalent/Poised TSS ES-I3 Cell Line embryonic stem cell
23 chr14:105330000-105333400 Active TSS H9 Cell Line embryonic stem cell
24 chr14:105330000-105333400 Active TSS iPS-15b Cell Line embryonic stem cell
25 chr14:105330200-105330600 Flanking Active TSS Liver Liver
26 chr14:105330200-105330600 Bivalent/Poised TSS Duodenum Smooth Muscle Duodenum
27 chr14:105330200-105330600 Bivalent Enhancer Fetal Brain Male brain
28 chr14:105330200-105330600 Flanking Active TSS Hela-S3 cervix
29 chr14:105330200-105330800 Flanking Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
30 chr14:105330200-105330800 Flanking Active TSS Pancreas Pancrea
31 chr14:105330200-105331200 Bivalent/Poised TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
32 chr14:105330200-105331200 Bivalent/Poised TSS HUES64 Cell Line embryonic stem cell
33 chr14:105330200-105331200 Bivalent/Poised TSS Fetal Brain Female brain
34 chr14:105330200-105331200 Bivalent/Poised TSS Fetal Intestine Small intestine
35 chr14:105330200-105331200 Bivalent/Poised TSS Fetal Kidney kidney
36 chr14:105330200-105331400 Flanking Bivalent TSS/Enh Foreskin Fibroblast Primary Cells skin01 Skin
37 chr14:105330200-105331400 Bivalent/Poised TSS HSMM muscle
38 chr14:105330200-105332400 Active TSS ES-UCSF4 Cell Line embryonic stem cell
39 chr14:105330200-105332600 Active TSS ES-WA7 Cell Line embryonic stem cell
40 chr14:105330200-105332600 Active TSS iPS DF 6.9 Cell Line embryonic stem cell
41 chr14:105330200-105332600 Active TSS Small Intestine intestine
42 chr14:105330200-105332800 Active TSS H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
43 chr14:105330200-105332800 Active TSS HUES48 Cell Line embryonic stem cell
44 chr14:105330200-105332800 Active TSS Rectal Smooth Muscle rectum
45 chr14:105330200-105333000 Active TSS Pancreatic Islets Pancreatic Islet
46 chr14:105330400-105330600 Enhancers Primary T helper cells PMA-I stimulated --
47 chr14:105330400-105330600 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
48 chr14:105330400-105330600 Bivalent Enhancer Primary hematopoietic stem cells G-CSF-mobilized Male --
49 chr14:105330400-105330600 Enhancers Brain Anterior Caudate brain
50 chr14:105330400-105330600 Bivalent/Poised TSS Brain Germinal Matrix brain

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