The 2.0 version of rSNPBase

Variant report

Variant rs57702810
Chromosome Location chr1:10046812-10046813
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:75 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:10021600-10049000 Weak transcription HSMM muscle
2 chr1:10028400-10050000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
3 chr1:10031600-10047200 Strong transcription Fetal Stomach stomach
4 chr1:10032800-10057000 Weak transcription Psoas Muscle Psoas
5 chr1:10034400-10048000 Weak transcription Stomach Mucosa stomach
6 chr1:10035600-10051800 Weak transcription iPS-15b Cell Line embryonic stem cell
7 chr1:10036000-10050400 Weak transcription Primary hematopoietic stem cells blood
8 chr1:10036600-10047800 Weak transcription NHEK skin
9 chr1:10036800-10051200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
10 chr1:10037200-10054600 Weak transcription Fetal Brain Female brain
11 chr1:10039400-10050800 Weak transcription Colonic Mucosa Colon
12 chr1:10039600-10048200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
13 chr1:10039600-10053600 Weak transcription Colon Smooth Muscle Colon
14 chr1:10041000-10049200 Weak transcription iPS-20b Cell Line embryonic stem cell
15 chr1:10042600-10048800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
16 chr1:10042600-10050200 Weak transcription Lung lung
17 chr1:10042600-10050800 Weak transcription GM12878-XiMat blood
18 chr1:10042600-10053800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
19 chr1:10042800-10048600 Weak transcription Thymus Thymus
20 chr1:10042800-10049800 Weak transcription Placenta Placenta
21 chr1:10042800-10049800 Weak transcription Right Ventricle heart
22 chr1:10042800-10050200 Weak transcription Primary T cells fromperipheralblood blood
23 chr1:10042800-10050600 Weak transcription Pancreas Pancrea
24 chr1:10042800-10050800 Weak transcription Primary hematopoietic stem cells short term culture blood
25 chr1:10042800-10051200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
26 chr1:10042800-10051200 Weak transcription HSMMtube muscle
27 chr1:10042800-10051600 Weak transcription Fetal Thymus thymus
28 chr1:10042800-10051600 Weak transcription Rectal Smooth Muscle rectum
29 chr1:10042800-10053000 Weak transcription Duodenum Smooth Muscle Duodenum
30 chr1:10042800-10055600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
31 chr1:10042800-10056600 Weak transcription Cortex derived primary cultured neurospheres brain
32 chr1:10042800-10057200 Weak transcription Gastric stomach
33 chr1:10043000-10050400 Weak transcription Sigmoid Colon Sigmoid Colon
34 chr1:10043000-10050600 Weak transcription Primary T regulatory cells fromperipheralblood blood
35 chr1:10043400-10048000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
36 chr1:10044200-10047800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
37 chr1:10044200-10049600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
38 chr1:10044200-10049600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
39 chr1:10044200-10050000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
40 chr1:10044200-10050000 Weak transcription Left Ventricle heart
41 chr1:10044200-10050400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
42 chr1:10044200-10050400 Weak transcription Stomach Smooth Muscle stomach
43 chr1:10044200-10050600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
44 chr1:10044200-10050800 Weak transcription Muscle Satellite Cultured Cells --
45 chr1:10044400-10049800 Weak transcription Spleen Spleen
46 chr1:10044400-10050200 Weak transcription Primary T cells from cord blood blood
47 chr1:10044600-10047400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
48 chr1:10044600-10049600 Weak transcription Adipose Nuclei Adipose
49 chr1:10044600-10050000 Weak transcription Skeletal Muscle Male skeletal muscle
50 chr1:10044600-10050800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin

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Last update: Aug 31, 2015