Variant report

Variant	rs577043408
Chromosome Location	chr18:45299389-45299390
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3425854	chr18:45188942-45336590	Enhancers Bivalent/Poised TSS Bivalent Enhancer Active TSS Flanking Active TSS Weak transcription ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
2	esv1008833	chr18:45299372-45304141	Enhancers Weak transcription Bivalent Enhancer	Chromatin interactive region	1 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr18:45282800-45300600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr18:45298600-45299600	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
3	chr18:45298800-45299400	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
4	chr18:45298800-45299600	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
5	chr18:45298800-45299600	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
6	chr18:45298800-45299600	Enhancers	Hela-S3	cervix
7	chr18:45299000-45299400	Bivalent Enhancer	Primary T cells fromperipheralblood	blood
8	chr18:45299000-45299400	Enhancers	Primary T killer naive cells fromperipheralblood	blood
9	chr18:45299200-45299600	Enhancers	Dnd41	blood
10	chr18:45299200-45299600	Weak transcription	HSMMtube	muscle
11	chr18:45299200-45299800	Enhancers	A549	lung

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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