Variant report
| Variant | rs577055004 |
|---|---|
| Chromosome Location | chr18:13227441-13227442 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr18:13223000-13231000 | Genic enhancers | Fetal Thymus | thymus |
| 2 | chr18:13223400-13232600 | Weak transcription | Fetal Intestine Large | intestine |
| 3 | chr18:13223400-13235400 | Weak transcription | Fetal Kidney | kidney |
| 4 | chr18:13223600-13232200 | Weak transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 5 | chr18:13223600-13235600 | Weak transcription | Fetal Intestine Small | intestine |
| 6 | chr18:13223600-13241400 | Weak transcription | Aorta | Aorta |
| 7 | chr18:13223800-13232400 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
| 8 | chr18:13223800-13234200 | Weak transcription | Liver | Liver |
| 9 | chr18:13223800-13259800 | Weak transcription | Primary hematopoietic stem cells short term culture | blood |
| 10 | chr18:13224000-13232000 | Weak transcription | Gastric | stomach |
| 11 | chr18:13224000-13234800 | Weak transcription | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
| 12 | chr18:13224000-13235400 | Weak transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 13 | chr18:13224000-13259800 | Weak transcription | Primary hematopoietic stem cells | blood |
| 14 | chr18:13224200-13232000 | Weak transcription | Brain Angular Gyrus | brain |
| 15 | chr18:13224200-13233400 | Weak transcription | HepG2 | liver |
| 16 | chr18:13224400-13228000 | Weak transcription | Esophagus | oesophagus |
| 17 | chr18:13224400-13228000 | Weak transcription | Fetal Brain Male | brain |
| 18 | chr18:13224400-13228400 | Weak transcription | Fetal Brain Female | brain |
| 19 | chr18:13224400-13228400 | Weak transcription | Lung | lung |
| 20 | chr18:13224400-13231200 | Weak transcription | Breast Myoepithelial Primary Cells | Breast |
| 21 | chr18:13224400-13231200 | Weak transcription | Fetal Muscle Leg | muscle |
| 22 | chr18:13224400-13231600 | Weak transcription | Brain Hippocampus Middle | brain |
| 23 | chr18:13224400-13232000 | Weak transcription | Brain Cingulate Gyrus | brain |
| 24 | chr18:13224400-13232000 | Weak transcription | Brain Inferior Temporal Lobe | brain |
| 25 | chr18:13224400-13232000 | Weak transcription | Brain Substantia Nigra | brain |
| 26 | chr18:13224400-13232200 | Weak transcription | Adipose Nuclei | Adipose |
| 27 | chr18:13224400-13232200 | Weak transcription | Rectal Smooth Muscle | rectum |
| 28 | chr18:13224400-13232400 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 29 | chr18:13224400-13234000 | Weak transcription | Pancreas | Pancrea |
| 30 | chr18:13224400-13234600 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
| 31 | chr18:13224400-13235400 | Weak transcription | Colon Smooth Muscle | Colon |
| 32 | chr18:13224400-13235600 | Weak transcription | Duodenum Mucosa | Duodenum |
| 33 | chr18:13224400-13242600 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 34 | chr18:13224400-13245400 | Weak transcription | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 35 | chr18:13224400-13259800 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 36 | chr18:13224600-13228000 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
| 37 | chr18:13224600-13228000 | Weak transcription | Stomach Smooth Muscle | stomach |
| 38 | chr18:13224600-13232000 | Weak transcription | Brain Anterior Caudate | brain |
| 39 | chr18:13225000-13231200 | Weak transcription | Fetal Lung | lung |
| 40 | chr18:13225400-13227800 | Weak transcription | Right Ventricle | heart |
| 41 | chr18:13225400-13229200 | Weak transcription | Brain Germinal Matrix | brain |
| 42 | chr18:13225400-13230400 | Weak transcription | Fetal Muscle Trunk | muscle |
| 43 | chr18:13225400-13232000 | Weak transcription | Right Atrium | heart |
| 44 | chr18:13225600-13227800 | Weak transcription | Primary T cells from cord blood | blood |
| 45 | chr18:13225600-13228000 | Weak transcription | Left Ventricle | heart |
| 46 | chr18:13225600-13232600 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 47 | chr18:13225800-13228000 | Weak transcription | Fetal Heart | heart |
| 48 | chr18:13227000-13228400 | Enhancers | Spleen | Spleen |
| 49 | chr18:13227000-13230400 | Genic enhancers | Thymus | Thymus |
| 50 | chr18:13227000-13231000 | Strong transcription | Fetal Stomach | stomach |
