Variant report

Variant	rs577187202
Chromosome Location	chr11:23564874-23564875
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 7 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:7 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832087	chr11:23404474-23569183	Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	5 gene(s)	inside rSNPs	diseases
2	nsv1038101	chr11:23556680-23685548	Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
3	nsv553757	chr11:23564329-23896729	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Bivalent/Poised TSS Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
4	nsv467737	chr11:23564843-23584367	Enhancers Weak transcription Active TSS Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
5	nsv553758	chr11:23564843-23584367	Enhancers Active TSS Weak transcription Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
6	nsv467738	chr11:23564843-23585876	Weak transcription Enhancers Active TSS Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
7	nsv553759	chr11:23564843-23585876	Weak transcription Enhancers Active TSS Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:23561600-23577600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr11:23561800-23565400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
3	chr11:23563000-23565400	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
4	chr11:23563400-23565400	Weak transcription	HUES48 Cell Line	embryonic stem cell
5	chr11:23564000-23565400	Weak transcription	iPS-15b Cell Line	embryonic stem cell
6	chr11:23564000-23565400	Weak transcription	iPS-20b Cell Line	embryonic stem cell
7	chr11:23564000-23565600	Enhancers	HUVEC	blood vessel
8	chr11:23564200-23565200	Weak transcription	HUES64 Cell Line	embryonic stem cell
9	chr11:23564400-23565400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
10	chr11:23564800-23565400	Weak transcription	Dnd41	blood

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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