Variant report

Variant rs577362780
Chromosome Location chr3:179384138-179384139
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:77 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:179372600-179384200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
2 chr3:179372600-179403200 Weak transcription Primary B cells from cord blood blood
3 chr3:179372600-179408400 Weak transcription Fetal Intestine Small intestine
4 chr3:179372600-179425200 Weak transcription Primary hematopoietic stem cells blood
5 chr3:179373200-179384200 Weak transcription NHLF lung
6 chr3:179374600-179408000 Weak transcription Primary hematopoietic stem cells short term culture blood
7 chr3:179375000-179389200 Weak transcription Hela-S3 cervix
8 chr3:179376000-179384200 Weak transcription Fetal Muscle Trunk muscle
9 chr3:179376600-179400800 Weak transcription Dnd41 blood
10 chr3:179379200-179385200 Enhancers Fetal Heart heart
11 chr3:179380400-179384400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
12 chr3:179380600-179418800 Weak transcription Primary T cells fromperipheralblood blood
13 chr3:179381600-179384200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
14 chr3:179382200-179385800 Enhancers Fetal Muscle Leg muscle
15 chr3:179382800-179384200 Enhancers Cortex derived primary cultured neurospheres brain
16 chr3:179383200-179384800 Enhancers ES-UCSF4 Cell Line embryonic stem cell
17 chr3:179383400-179384800 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
18 chr3:179383400-179384800 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
19 chr3:179383400-179386600 Enhancers Left Ventricle heart
20 chr3:179383600-179384600 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
21 chr3:179383600-179385000 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
22 chr3:179383600-179385000 Enhancers Brain Substantia Nigra brain
23 chr3:179383800-179384400 Enhancers H9 Cell Line embryonic stem cell
24 chr3:179383800-179384400 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
25 chr3:179383800-179384600 Enhancers HUVEC blood vessel
26 chr3:179383800-179384600 Enhancers Osteobl bone
27 chr3:179383800-179384800 Enhancers ES-I3 Cell Line embryonic stem cell
28 chr3:179383800-179384800 Enhancers HUES6 Cell Line embryonic stem cell
29 chr3:179383800-179384800 Enhancers iPS-15b Cell Line embryonic stem cell
30 chr3:179383800-179384800 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
31 chr3:179383800-179384800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
32 chr3:179383800-179384800 Enhancers Muscle Satellite Cultured Cells --
33 chr3:179383800-179384800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
34 chr3:179383800-179384800 Enhancers Esophagus oesophagus
35 chr3:179383800-179384800 Enhancers Fetal Lung lung
36 chr3:179383800-179384800 Enhancers Psoas Muscle Psoas
37 chr3:179383800-179384800 Enhancers HSMM muscle
38 chr3:179383800-179385000 Enhancers H1 Cell Line embryonic stem cell
39 chr3:179383800-179385000 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
40 chr3:179383800-179385000 Enhancers HUES48 Cell Line embryonic stem cell
41 chr3:179383800-179385000 Enhancers HUES64 Cell Line embryonic stem cell
42 chr3:179383800-179385000 Enhancers iPS-18 Cell Line embryonic stem cell
43 chr3:179383800-179385000 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
44 chr3:179383800-179385000 Enhancers Brain Hippocampus Middle brain
45 chr3:179383800-179385000 Enhancers Brain Dorsolateral Prefrontal Cortex brain
46 chr3:179383800-179385000 Enhancers Fetal Brain Male brain
47 chr3:179383800-179385000 Flanking Active TSS Skeletal Muscle Male skeletal muscle
48 chr3:179383800-179385000 Flanking Active TSS Skeletal Muscle Female skeletal muscle
49 chr3:179383800-179385200 Enhancers Fetal Adrenal Gland Adrenal Gland
50 chr3:179383800-179385400 Enhancers Ovary ovary

Quick Search:


  
Input of quick search could be:

what's new

Quick links