Variant report

Variant	rs577403553
Chromosome Location	chr13:50463227-50463228
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:0)
CpG islands
(count:61)
Chromatin interactive
region (count:0)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

No data

(count:61 , 50 per page) page: 1 2

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr13:50463192-50463242	SK-N-MC	brain:	n/a
2	chr13:50463192-50463242	RPTEC	kidney:	n/a
3	chr13:50463192-50463242	NHBE	bronchial:	n/a
4	chr13:50463192-50463242	HUVEC	blood vessel:	n/a
5	chr13:50463192-50463242	H1-hESC	embryonic stem cell:	embryo
6	chr13:50463192-50463242	HRCEpiC	kidney:	n/a
7	chr13:50463192-50463242	AoSMC	blood vessel:	n/a
8	chr13:50463192-50463242	GM06990	blood:	n/a
9	chr13:50463192-50463242	PANC-1	pancreas:	n/a
10	chr13:50463192-50463242	A549	lung:	n/a
11	chr13:50463192-50463242	GM12878	blood:	n/a
12	chr13:50463192-50463242	NB4	blood:	n/a
13	chr13:50463192-50463242	HMEC	breast:	n/a
14	chr13:50463192-50463242	BJ	skin:	n/a
15	chr13:50463192-50463242	ovcar-3	ovarian:	n/a
16	chr13:50463192-50463242	HCF	heart:	n/a
17	chr13:50463192-50463242	U87	brain:	n/a
18	chr13:50463192-50463242	SKMC	muscle:	n/a
19	chr13:50463192-50463242	HRE	kidney:	n/a
20	chr13:50463192-50463242	AG09309	skin:	n/a
21	chr13:50463192-50463242	SAEC	small airway:	n/a
22	chr13:50463192-50463242	AG09319	gingival:	n/a
23	chr13:50463192-50463242	HL-60	blood:	n/a
24	chr13:50463192-50463242	HEEpiC	esophagus:	n/a
25	chr13:50463192-50463242	HPAEpiC	pulmonary alveolar:	n/a
26	chr13:50463192-50463242	HNPCEpiC	eye:	n/a
27	chr13:50463192-50463242	HepG2	liver:	n/a
28	chr13:50463192-50463242	SK-N-SH	brain:	n/a
29	chr13:50463192-50463242	IMR90	lung:	fetal
30	chr13:50463192-50463242	SK-N-SH_RA	brain:	n/a
31	chr13:50463192-50463242	CMK	blood:	n/a
32	chr13:50463192-50463242	K562	blood:	n/a
33	chr13:50463192-50463242	BE2_C	brain:	n/a
34	chr13:50463192-50463242	HCT-116	colon:	n/a
35	chr13:50463192-50463242	Caco-2	colon:	n/a
36	chr13:50463192-50463242	NT2-D1	testis:	n/a
37	chr13:50463192-50463242	Jurkat	blood:	n/a
38	chr13:50463192-50463242	Hepatocyte	liver:	n/a
39	chr13:50463192-50463242	GM12892	blood:	n/a
40	chr13:50463192-50463242	AG10803	skin:	n/a
41	chr13:50463192-50463242	NH-A	brain:	n/a
42	chr13:50463192-50463242	GM12891	blood:	n/a
43	chr13:50463192-50463242	PrEC	prostate:	n/a
44	chr13:50463192-50463242	HRPEpiC	eye:	n/a
45	chr13:50463192-50463242	LNCaP	prostate:	n/a
46	chr13:50463192-50463242	HIPEpiC	eye:	n/a
47	chr13:50463192-50463242	HCPEpiC	choroid plexus:	n/a
48	chr13:50463192-50463242	MCF10A-Er-Src	breast:	n/a
49	chr13:50463192-50463242	HAEpiC	amniotic membrane:	n/a
50	chr13:50463192-50463242	MCF-7	breast:	n/a

No data

Variant related genes	Relation type
CTAGE10P	CpG island

Extended variants
information (count: 1 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3436655	chr13:50462077-50472044	Enhancers Weak transcription	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
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