The 2.0 version of rSNPBase

Variant report

Variant rs577411564
Chromosome Location chr14:39657810-39657811
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:42 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr14:39647800-39658800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
2 chr14:39651000-39661600 Weak transcription Primary T helper naive cells fromperipheralblood blood
3 chr14:39651000-39662000 Weak transcription Pancreas Pancrea
4 chr14:39653000-39658000 Weak transcription Fetal Lung lung
5 chr14:39653000-39662000 Weak transcription Primary hematopoietic stem cells blood
6 chr14:39653200-39661600 Weak transcription Right Ventricle heart
7 chr14:39653400-39662000 Weak transcription NHDF-Ad bronchial
8 chr14:39653600-39658800 Weak transcription Primary T killer naive cells fromperipheralblood blood
9 chr14:39654400-39658400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
10 chr14:39654400-39658800 Weak transcription Thymus Thymus
11 chr14:39654400-39661600 Weak transcription Left Ventricle heart
12 chr14:39654400-39661800 Weak transcription Fetal Adrenal Gland Adrenal Gland
13 chr14:39654400-39661800 Weak transcription Skeletal Muscle Male skeletal muscle
14 chr14:39654400-39672000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
15 chr14:39654600-39661600 Weak transcription Psoas Muscle Psoas
16 chr14:39654800-39658000 Weak transcription Fetal Brain Female brain
17 chr14:39654800-39658200 Weak transcription Adipose Nuclei Adipose
18 chr14:39654800-39659400 Weak transcription Primary neutrophils fromperipheralblood blood
19 chr14:39654800-39662000 Weak transcription Liver Liver
20 chr14:39655000-39658400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
21 chr14:39655000-39658800 Weak transcription Stomach Smooth Muscle stomach
22 chr14:39655200-39658000 Weak transcription Placenta Placenta
23 chr14:39655200-39658400 Weak transcription Fetal Muscle Leg muscle
24 chr14:39655200-39661600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
25 chr14:39655400-39661600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
26 chr14:39655400-39662800 Weak transcription Fetal Intestine Small intestine
27 chr14:39655800-39658000 Enhancers iPS-15b Cell Line embryonic stem cell
28 chr14:39656200-39658000 Enhancers iPS-18 Cell Line embryonic stem cell
29 chr14:39656200-39658200 Enhancers ES-I3 Cell Line embryonic stem cell
30 chr14:39656400-39658000 Enhancers HUES48 Cell Line embryonic stem cell
31 chr14:39656400-39658000 Weak transcription GM12878-XiMat blood
32 chr14:39656400-39658400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
33 chr14:39657000-39658000 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
34 chr14:39657000-39658400 Enhancers HMEC breast
35 chr14:39657200-39658000 Enhancers ES-UCSF4 Cell Line embryonic stem cell
36 chr14:39657200-39658000 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
37 chr14:39657200-39658000 Enhancers NH-A brain
38 chr14:39657200-39662600 Weak transcription HSMM muscle
39 chr14:39657400-39661000 Weak transcription Breast Myoepithelial Primary Cells Breast
40 chr14:39657600-39658000 Flanking Active TSS NHEK skin
41 chr14:39657800-39658000 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
42 chr14:39657800-39658200 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin

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Last update: Aug 31, 2015