Variant report

Variant rs577469855
Chromosome Location chr7:100492813-100492814
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:122 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:100491200-100493600 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
2 chr7:100491600-100493400 Flanking Bivalent TSS/Enh Foreskin Fibroblast Primary Cells skin02 Skin
3 chr7:100491800-100493600 Active TSS H9 Cell Line embryonic stem cell
4 chr7:100491800-100493600 Active TSS HSMM muscle
5 chr7:100491800-100493800 Bivalent/Poised TSS iPS-18 Cell Line embryonic stem cell
6 chr7:100491800-100495000 Bivalent/Poised TSS HUES64 Cell Line embryonic stem cell
7 chr7:100492000-100493200 Active TSS H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
8 chr7:100492000-100493400 Flanking Bivalent TSS/Enh Foreskin Keratinocyte Primary Cells skin02 Skin
9 chr7:100492000-100493600 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
10 chr7:100492000-100493600 Active TSS iPS DF 6.9 Cell Line embryonic stem cell
11 chr7:100492000-100493600 Flanking Bivalent TSS/Enh Foreskin Keratinocyte Primary Cells skin03 Skin
12 chr7:100492000-100493800 Bivalent/Poised TSS ES-I3 Cell Line embryonic stem cell
13 chr7:100492000-100493800 Active TSS Brain Dorsolateral Prefrontal Cortex brain
14 chr7:100492000-100494000 Flanking Bivalent TSS/Enh Foreskin Fibroblast Primary Cells skin01 Skin
15 chr7:100492200-100493000 Active TSS HUES48 Cell Line embryonic stem cell
16 chr7:100492200-100493000 Flanking Bivalent TSS/Enh Fetal Stomach stomach
17 chr7:100492200-100493000 Weak transcription Gastric stomach
18 chr7:100492200-100493000 Flanking Active TSS Placenta Amnion Placenta Amnion
19 chr7:100492200-100493000 Active TSS GM12878-XiMat blood
20 chr7:100492200-100493200 Active TSS Breast Myoepithelial Primary Cells Breast
21 chr7:100492200-100493400 Flanking Active TSS H1 Derived Mesenchymal Stem Cells ES cell derived
22 chr7:100492200-100493400 Flanking Bivalent TSS/Enh Colonic Mucosa Colon
23 chr7:100492200-100493600 Active TSS iPS-15b Cell Line embryonic stem cell
24 chr7:100492200-100493600 Flanking Active TSS Primary hematopoietic stem cells blood
25 chr7:100492200-100493600 Bivalent/Poised TSS Skeletal Muscle Male skeletal muscle
26 chr7:100492200-100493600 Active TSS Skeletal Muscle Female skeletal muscle
27 chr7:100492200-100493800 Bivalent/Poised TSS HUES6 Cell Line embryonic stem cell
28 chr7:100492200-100493800 Bivalent/Poised TSS iPS-20b Cell Line embryonic stem cell
29 chr7:100492200-100493800 Active TSS HepG2 liver
30 chr7:100492200-100494200 Bivalent Enhancer Spleen Spleen
31 chr7:100492200-100495000 Bivalent/Poised TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
32 chr7:100492400-100493000 Active TSS H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
33 chr7:100492400-100493000 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
34 chr7:100492400-100493000 Active TSS ES-UCSF4 Cell Line embryonic stem cell
35 chr7:100492400-100493000 Flanking Active TSS Cortex derived primary cultured neurospheres brain
36 chr7:100492400-100493000 Enhancers Pancreas Pancrea
37 chr7:100492400-100493000 Active TSS Rectal Mucosa Donor 31 rectum
38 chr7:100492400-100493200 Bivalent Enhancer Primary monocytes fromperipheralblood blood
39 chr7:100492400-100493200 Flanking Bivalent TSS/Enh Primary T helper naive cells fromperipheralblood blood
40 chr7:100492400-100493200 Flanking Bivalent TSS/Enh Fetal Adrenal Gland Adrenal Gland
41 chr7:100492400-100493200 Flanking Bivalent TSS/Enh Fetal Intestine Large intestine
42 chr7:100492400-100493200 Flanking Bivalent TSS/Enh Fetal Muscle Trunk muscle
43 chr7:100492400-100493400 Flanking Bivalent TSS/Enh Primary T helper cells PMA-I stimulated --
44 chr7:100492400-100493400 Flanking Bivalent TSS/Enh Primary T helper cells fromperipheralblood blood
45 chr7:100492400-100493400 Flanking Bivalent TSS/Enh Primary T regulatory cells fromperipheralblood blood
46 chr7:100492400-100493400 Flanking Bivalent TSS/Enh Primary T cells effector/memory enriched fromperipheralblood blood
47 chr7:100492400-100493400 Flanking Active TSS Ganglion Eminence derived primary cultured neurospheres brain
48 chr7:100492400-100493600 Bivalent/Poised TSS H1 Cell Line embryonic stem cell
49 chr7:100492400-100493600 Bivalent/Poised TSS Duodenum Mucosa Duodenum
50 chr7:100492400-100493600 Bivalent Enhancer Fetal Brain Male brain

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