Variant report

Variant	rs57748016
Chromosome Location	chr21:37875919-37875920
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs7278181	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv834090	chr21:37812545-38009542	Enhancers Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Strong transcription Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr21:37858600-37881600	Weak transcription	Right Atrium	heart
2	chr21:37860600-37882200	Weak transcription	HUVEC	blood vessel
3	chr21:37872400-37881400	Weak transcription	Esophagus	oesophagus
4	chr21:37872600-37876800	Weak transcription	A549	lung
5	chr21:37872600-37880800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
6	chr21:37873400-37876800	Weak transcription	Osteobl	bone
7	chr21:37873600-37880000	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
8	chr21:37874200-37878400	Weak transcription	HepG2	liver
9	chr21:37874800-37877000	Weak transcription	Fetal Lung	lung
10	chr21:37875000-37877000	Weak transcription	Liver	Liver

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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