Variant report

Variant	rs577491769
Chromosome Location	chr11:120650942-120650943
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 5 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1053607	chr11:120540795-120802006	Enhancers Strong transcription Weak transcription Bivalent Enhancer Flanking Active TSS ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
2	nsv1038264	chr11:120582595-120799335	Enhancers Weak transcription Bivalent Enhancer ZNF genes & repeats Flanking Active TSS Strong transcription Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
3	nsv541181	chr11:120582595-120799335	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS Bivalent Enhancer Strong transcription Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
4	nsv832286	chr11:120585843-120745846	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS Active TSS Bivalent/Poised TSS Strong transcription ZNF genes & repeats Flanking Bivalent TSS/Enh Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
5	nsv982961	chr11:120649840-120656069	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a

No data

Chromatin state (count:20 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:120647800-120652200	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr11:120647800-120653400	Weak transcription	Cortex derived primary cultured neurospheres	brain
3	chr11:120648400-120651200	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
4	chr11:120648400-120651400	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
5	chr11:120649400-120652000	Enhancers	HUVEC	blood vessel
6	chr11:120649600-120652400	Weak transcription	iPS-15b Cell Line	embryonic stem cell
7	chr11:120649600-120653400	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
8	chr11:120649800-120653400	Weak transcription	iPS-18 Cell Line	embryonic stem cell
9	chr11:120649800-120653400	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
10	chr11:120650000-120654000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
11	chr11:120650200-120653600	Weak transcription	HUES64 Cell Line	embryonic stem cell
12	chr11:120650400-120651200	Enhancers	Rectal Smooth Muscle	rectum
13	chr11:120650400-120652200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
14	chr11:120650600-120653400	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
15	chr11:120650600-120653800	Weak transcription	HUES48 Cell Line	embryonic stem cell
16	chr11:120650800-120652400	Weak transcription	H1 Cell Line	embryonic stem cell
17	chr11:120650800-120652400	Weak transcription	H9 Cell Line	embryonic stem cell
18	chr11:120650800-120652600	Weak transcription	iPS-20b Cell Line	embryonic stem cell
19	chr11:120650800-120652600	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
20	chr11:120650800-120652800	Weak transcription	ES-WA7 Cell Line	embryonic stem cell

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