Variant report

Variant	rs577546857
Chromosome Location	chr8:124450860-124450861
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:124446421..124448843-chr8:124450506..124453127,3	MCF-7	breast:
2	chr8:124435837..124438312-chr8:124449085..124450933,2	MCF-7	breast:

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831449	chr8:124276685-124471740	Weak transcription Active TSS Genic enhancers Enhancers Flanking Active TSS Strong transcription Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	42 gene(s)	inside rSNPs	diseases
2	esv3384879	chr8:124450305-124450875	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:122 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:124430200-124455400	Weak transcription	Fetal Kidney	kidney
2	chr8:124430200-124456000	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
3	chr8:124430200-124472800	Weak transcription	Colonic Mucosa	Colon
4	chr8:124430200-124484600	Weak transcription	Psoas Muscle	Psoas
5	chr8:124430400-124453000	Weak transcription	Fetal Lung	lung
6	chr8:124430600-124461800	Weak transcription	Fetal Brain Male	brain
7	chr8:124431200-124460200	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
8	chr8:124431200-124462200	Weak transcription	Fetal Heart	heart
9	chr8:124436600-124464400	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
10	chr8:124437600-124462400	Weak transcription	Placenta Amnion	Placenta Amnion
11	chr8:124439000-124451200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
12	chr8:124439400-124453600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
13	chr8:124439800-124451600	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
14	chr8:124440000-124453600	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
15	chr8:124440200-124454200	Strong transcription	Dnd41	blood
16	chr8:124440400-124453200	Strong transcription	Fetal Intestine Small	intestine
17	chr8:124440600-124454200	Strong transcription	Fetal Adrenal Gland	Adrenal Gland
18	chr8:124440600-124454400	Strong transcription	Primary hematopoietic stem cells short term culture	blood
19	chr8:124440600-124456200	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
20	chr8:124441000-124454400	Strong transcription	HepG2	liver
21	chr8:124441400-124460200	Weak transcription	Stomach Mucosa	stomach
22	chr8:124441600-124461600	Strong transcription	Breast Myoepithelial Primary Cells	Breast
23	chr8:124441600-124462600	Weak transcription	Colon Smooth Muscle	Colon
24	chr8:124442200-124454200	Strong transcription	Stomach Smooth Muscle	stomach
25	chr8:124442600-124458600	Weak transcription	Hela-S3	cervix
26	chr8:124443600-124451400	Strong transcription	Ovary	ovary
27	chr8:124443600-124454600	Weak transcription	Pancreatic Islets	Pancreatic Islet
28	chr8:124443800-124454600	Strong transcription	Primary T cells from cord blood	blood
29	chr8:124444000-124453800	Weak transcription	Placenta	Placenta
30	chr8:124444200-124453000	Weak transcription	Rectal Smooth Muscle	rectum
31	chr8:124444400-124451000	Weak transcription	NH-A	brain
32	chr8:124445400-124454200	Strong transcription	Duodenum Mucosa	Duodenum
33	chr8:124445600-124453200	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
34	chr8:124445600-124465400	Weak transcription	Pancreas	Pancrea
35	chr8:124445800-124453000	Weak transcription	H9 Cell Line	embryonic stem cell
36	chr8:124446400-124452200	Strong transcription	Fetal Thymus	thymus
37	chr8:124447000-124452400	Strong transcription	GM12878-XiMat	blood
38	chr8:124447000-124456600	Strong transcription	Liver	Liver
39	chr8:124447600-124454800	Strong transcription	Primary T regulatory cells fromperipheralblood	blood
40	chr8:124447600-124467800	Weak transcription	iPS-15b Cell Line	embryonic stem cell
41	chr8:124448400-124451200	Strong transcription	Primary T helper cells PMA-I stimulated	--
42	chr8:124448400-124454400	Strong transcription	iPS-20b Cell Line	embryonic stem cell
43	chr8:124448600-124454400	Strong transcription	HUES6 Cell Line	embryonic stem cell
44	chr8:124448600-124454400	Strong transcription	HUES64 Cell Line	embryonic stem cell
45	chr8:124448600-124454400	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
46	chr8:124448600-124454600	Strong transcription	Primary T cells fromperipheralblood	blood
47	chr8:124448600-124454600	Strong transcription	Adipose Nuclei	Adipose
48	chr8:124448600-124454600	Strong transcription	Rectal Mucosa Donor 29	rectum
49	chr8:124448800-124451000	Strong transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
50	chr8:124448800-124451200	Strong transcription	A549	lung

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