The 2.0 version of rSNPBase

Variant report

Variant rs577598674
Chromosome Location chr2:172587778-172587779
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:172545200-172611200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr2:172545400-172588000 Weak transcription H9 Cell Line embryonic stem cell
3 chr2:172545800-172588000 Weak transcription Right Ventricle heart
4 chr2:172546600-172602800 Weak transcription Small Intestine intestine
5 chr2:172554400-172588000 Weak transcription Esophagus oesophagus
6 chr2:172559600-172605200 Weak transcription Colonic Mucosa Colon
7 chr2:172561200-172587800 Weak transcription Rectal Smooth Muscle rectum
8 chr2:172561400-172601800 Weak transcription Fetal Heart heart
9 chr2:172564200-172610000 Strong transcription Primary monocytes fromperipheralblood blood
10 chr2:172569000-172618600 Weak transcription ES-I3 Cell Line embryonic stem cell
11 chr2:172569800-172611400 Strong transcription Monocytes-CD14+_RO01746 blood
12 chr2:172571400-172597800 Strong transcription HSMM muscle
13 chr2:172571800-172594200 Strong transcription HUVEC blood vessel
14 chr2:172572000-172595400 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
15 chr2:172574800-172587800 Weak transcription Lung lung
16 chr2:172575400-172595600 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
17 chr2:172579800-172589200 Strong transcription Primary T helper cells fromperipheralblood blood
18 chr2:172579800-172595600 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
19 chr2:172579800-172611200 Strong transcription Adipose Nuclei Adipose
20 chr2:172580000-172598000 Strong transcription Rectal Mucosa Donor 31 rectum
21 chr2:172580200-172588200 Strong transcription Muscle Satellite Cultured Cells --
22 chr2:172580200-172589600 Strong transcription Primary T regulatory cells fromperipheralblood blood
23 chr2:172580200-172590000 Strong transcription Breast Myoepithelial Primary Cells Breast
24 chr2:172580200-172595400 Strong transcription Duodenum Mucosa Duodenum
25 chr2:172580200-172595400 Strong transcription Rectal Mucosa Donor 29 rectum
26 chr2:172580200-172595600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
27 chr2:172580200-172596000 Strong transcription Primary hematopoietic stem cells blood
28 chr2:172580200-172611200 Strong transcription Placenta Placenta
29 chr2:172580400-172589600 Strong transcription Primary T cells fromperipheralblood blood
30 chr2:172580400-172595400 Strong transcription Primary Natural Killer cells fromperipheralblood blood
31 chr2:172580400-172595600 Strong transcription Primary T cells from cord blood blood
32 chr2:172580400-172610600 Strong transcription Fetal Thymus thymus
33 chr2:172580400-172611400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
34 chr2:172580400-172611400 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
35 chr2:172580600-172595400 Strong transcription Primary B cells from cord blood blood
36 chr2:172580800-172587800 Strong transcription Primary T killer memory cells from peripheral blood blood
37 chr2:172580800-172595600 Strong transcription Primary neutrophils fromperipheralblood blood
38 chr2:172581000-172595000 Weak transcription iPS-15b Cell Line embryonic stem cell
39 chr2:172581000-172595400 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
40 chr2:172581200-172587800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
41 chr2:172581200-172587800 Weak transcription Gastric stomach
42 chr2:172581200-172587800 Weak transcription Spleen Spleen
43 chr2:172581200-172588000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
44 chr2:172581200-172588000 Weak transcription Aorta Aorta
45 chr2:172581200-172588000 Weak transcription Fetal Intestine Small intestine
46 chr2:172581200-172588000 Weak transcription Pancreas Pancrea
47 chr2:172581200-172589800 Strong transcription Primary T helper cells PMA-I stimulated --
48 chr2:172581200-172592600 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
49 chr2:172581200-172601800 Weak transcription Stomach Mucosa stomach
50 chr2:172581400-172594200 Strong transcription HUES48 Cell Line embryonic stem cell

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Last update: Aug 31, 2015