Variant report

Variant	rs577640870
Chromosome Location	chr4:103387600-103387601
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 1 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv830020	chr4:103387343-103581284	Strong transcription Weak transcription Genic enhancers Enhancers Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	29 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:19 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:103381400-103387600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
2	chr4:103385400-103387600	Enhancers	Dnd41	blood
3	chr4:103385600-103387800	Enhancers	Primary T cells from cord blood	blood
4	chr4:103386000-103388200	Enhancers	HUVEC	blood vessel
5	chr4:103386600-103390600	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
6	chr4:103386600-103390600	Weak transcription	Primary T helper naive cells from peripheral blood	blood
7	chr4:103386600-103390600	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
8	chr4:103386600-103390600	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
9	chr4:103386600-103390600	Weak transcription	Primary T killer memory cells from peripheral blood	blood
10	chr4:103386600-103390800	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
11	chr4:103386600-103390800	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
12	chr4:103386800-103390200	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
13	chr4:103386800-103390800	Weak transcription	Primary T helper cells fromperipheralblood	blood
14	chr4:103387200-103387600	Enhancers	NHEK	skin
15	chr4:103387400-103387600	Enhancers	Primary T helper cells PMA-I stimulated	--
16	chr4:103387400-103387800	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
17	chr4:103387600-103387800	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
18	chr4:103387600-103390200	Weak transcription	Dnd41	blood
19	chr4:103387600-103390600	Weak transcription	Primary T helper cells PMA-I stimulated	--

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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