Variant report

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	POLR2A	chr10:23726938-23727186	MCF10A-Er-Src	breast:	n/a	n/a
2	POLR2A	chr10:23726898-23730348	Hela-S3	cervix:	n/a	n/a
3	POLR2A	chr10:23726602-23727031	MCF10A-Er-Src	breast:	n/a	n/a
4	E2F6	chr10:23726943-23728776	K562	blood:	n/a	chr10:23728108-23728117 chr10:23728168-23728180 chr10:23728171-23728180 chr10:23727864-23727873 chr10:23727744-23727756 chr10:23727989-23727998 chr10:23727745-23727756
5	E2F6	chr10:23726867-23728142	H1-hESC	embryonic stem cell:	n/a	chr10:23728108-23728117 chr10:23727864-23727873 chr10:23727744-23727756 chr10:23727989-23727998 chr10:23727745-23727756

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:23718207..23720291-chr10:23725300..23726968,2	K562	blood:
2	chr10:23718339..23720291-chr10:23725094..23726968,2	K562	blood:

Variant related genes	Relation type
OTUD1	TF binding region

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv825305	chr10:23698620-23740919	Weak transcription Flanking Active TSS Enhancers Active TSS Bivalent/Poised TSS Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region miRNA target site	6 gene(s)	inside rSNPs	diseases
2	nsv975033	chr10:23726218-23738848	Active TSS Enhancers Weak transcription Flanking Active TSS Genic enhancers Bivalent/Poised TSS Strong transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region miRNA target site	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:20 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:23721400-23727400	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
2	chr10:23721800-23727200	Weak transcription	HMEC	breast
3	chr10:23721800-23727400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
4	chr10:23721800-23727400	Weak transcription	NHEK	skin
5	chr10:23722000-23727200	Weak transcription	Rectal Mucosa Donor 29	rectum
6	chr10:23722000-23727200	Weak transcription	Rectal Mucosa Donor 31	rectum
7	chr10:23722200-23727000	Weak transcription	Hela-S3	cervix
8	chr10:23723200-23727000	Weak transcription	Primary B cells from peripheral blood	blood
9	chr10:23724400-23727000	Enhancers	Monocytes-CD14+_RO01746	blood
10	chr10:23724800-23727200	Enhancers	Primary monocytes fromperipheralblood	blood
11	chr10:23725200-23727200	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
12	chr10:23725600-23727400	Enhancers	Stomach Mucosa	stomach
13	chr10:23726200-23727200	Enhancers	Primary neutrophils fromperipheralblood	blood
14	chr10:23726400-23727400	Weak transcription	Breast Myoepithelial Primary Cells	Breast
15	chr10:23726600-23727000	Enhancers	Skeletal Muscle Male	skeletal muscle
16	chr10:23726600-23727400	Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
17	chr10:23726800-23727200	Enhancers	Primary B cells from cord blood	blood
18	chr10:23726800-23727400	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
19	chr10:23726800-23727400	Enhancers	Brain Hippocampus Middle	brain
20	chr10:23726800-23727400	Enhancers	Placenta	Placenta

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