Variant report

Variant	rs577690908
Chromosome Location	chr6:32145506-32145507
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	MAFK	chr6:32145222-32146222	HepG2	liver:	n/a	chr6:32145583-32145598
2	GABPA	chr6:32145087-32146437	MCF-7	breast:	n/a	chr6:32145760-32145771 chr6:32145757-32145771 chr6:32145760-32145769
3	CREB1	chr6:32144751-32146932	HepG2	liver:	n/a	n/a
4	YY1	chr6:32145196-32146394	SK-N-SH_RA	brain:	n/a	chr6:32145490-32145498 chr6:32145487-32145509 chr6:32145484-32145504 chr6:32145671-32145683
5	GABPA	chr6:32145022-32145687	A549	lung:	n/a	n/a
6	CREB1	chr6:32143138-32146895	HepG2	liver:	n/a	n/a
7	UBTF	chr6:32144786-32146120	K562	blood:	n/a	n/a
8	SP4	chr6:32145228-32146316	H1-hESC	embryonic stem cell:	n/a	n/a
9	ZNF384	chr6:32145387-32146089	K562	blood:	n/a	n/a
10	TBP	chr6:32144739-32146685	K562	blood:	n/a	n/a
11	E2F6	chr6:32144908-32146810	K562	blood:	n/a	chr6:32145761-32145770 chr6:32146093-32146105 chr6:32146093-32146102 chr6:32145818-32145829 chr6:32146094-32146101 chr6:32146444-32146456 chr6:32146094-32146101 chr6:32145558-32145567 chr6:32146094-32146101
12	MYC	chr6:32144659-32147055	K562	blood:	n/a	chr6:32145674-32145683 chr6:32146438-32146448
13	ATF1	chr6:32145320-32146791	K562	blood:	n/a	n/a
14	POLR2A	chr6:32144820-32146774	ECC-1	luminal epithelium:	n/a	n/a
15	TAF1	chr6:32144795-32146372	H1-hESC	embryonic stem cell:	n/a	n/a
16	CREB1	chr6:32144982-32146303	H1-hESC	embryonic stem cell:	n/a	n/a
17	TBL1XR1	chr6:32144702-32146714	K562	blood:	n/a	n/a
18	SP2	chr6:32145079-32146499	HepG2	liver:	n/a	chr6:32146141-32146164 chr6:32145159-32145168
19	CTCF	chr6:32145097-32145644	K562	blood:	n/a	n/a
20	MAFK	chr6:32144675-32146276	Hela-S3	cervix:	n/a	chr6:32145583-32145598
21	MAX	chr6:32145238-32146940	K562	blood:	n/a	chr6:32145674-32145683 chr6:32146438-32146448
22	CHD2	chr6:32144718-32146700	K562	blood:	n/a	chr6:32146668-32146678 chr6:32146447-32146457
23	ZNF263	chr6:32144521-32146174	HEK293-T-REx	kidney:	n/a	chr6:32144982-32145003
24	POLR2A	chr6:32142951-32146868	H1-hESC	embryonic stem cell:	n/a	n/a
25	TAF1	chr6:32144696-32146750	H1-hESC	embryonic stem cell:	n/a	n/a
26	TCF7L2	chr6:32144804-32146202	Hela-S3	cervix:	n/a	chr6:32145633-32145647
27	YY1	chr6:32145194-32146076	H1-hESC	embryonic stem cell:	n/a	chr6:32145490-32145498 chr6:32145487-32145509 chr6:32145484-32145504 chr6:32145671-32145683
28	MYC	chr6:32144404-32147195	K562	blood:	n/a	chr6:32145674-32145683 chr6:32146438-32146448
29	POLR2A	chr6:32142979-32146739	Raji	blood:	n/a	n/a
30	TAF1	chr6:32145222-32145638	GM12878	blood:	n/a	n/a
31	NRF1	chr6:32145006-32146228	GM12878	blood:	n/a	chr6:32145760-32145771 chr6:32145757-32145771 chr6:32145759-32145770 chr6:32145760-32145769
32	HCFC1	chr6:32144809-32146829	K562	blood:	n/a	n/a
33	YY1	chr6:32145008-32146300	SK-N-SH	brain:	n/a	chr6:32145490-32145498 chr6:32145487-32145509 chr6:32145484-32145504 chr6:32145671-32145683
34	MXI1	chr6:32144773-32146804	Hela-S3	cervix:	n/a	chr6:32145668-32145683 chr6:32145670-32145685
35	ARID3A	chr6:32144901-32146811	HepG2	liver:	n/a	n/a
36	TCF7L2	chr6:32144819-32146216	HCT-116	colon:	n/a	chr6:32145633-32145647
37	RFX5	chr6:32145446-32146257	Hela-S3	cervix:	n/a	chr6:32145804-32145813 chr6:32145669-32145684 chr6:32145669-32145684 chr6:32145559-32145568 chr6:32145671-32145686 chr6:32145669-32145684 chr6:32145668-32145685
38	BHLHE40	chr6:32145483-32146830	GM12878	blood:	n/a	chr6:32146640-32146649 chr6:32146640-32146649 chr6:32146634-32146655 chr6:32146639-32146648
39	MAZ	chr6:32145228-32146438	HepG2	liver:	n/a	chr6:32145674-32145683
40	JUND	chr6:32143693-32146828	K562	blood:	n/a	chr6:32145560-32145569 chr6:32146443-32146452
41	POLR2A	chr6:32144738-32146537	Hela-S3	cervix:	n/a	n/a
42	POLR2A	chr6:32140323-32146931	SK-N-MC	brain:	n/a	n/a
43	POLR2A	chr6:32144961-32145632	GM12891	blood:	n/a	n/a
44	POLR2A	chr6:32145113-32145823	GM12892	blood:	n/a	n/a
45	POLR2A	chr6:32145060-32146595	GM19193	blood:	n/a	n/a
46	E2F4	chr6:32145303-32146684	K562	blood:	n/a	chr6:32146092-32146103 chr6:32145761-32145770 chr6:32146093-32146105 chr6:32146093-32146102 chr6:32145818-32145829 chr6:32146094-32146101 chr6:32146444-32146456 chr6:32146094-32146101 chr6:32145558-32145567 chr6:32146094-32146101
47	EP300	chr6:32145110-32146362	GM12878	blood:	n/a	n/a
48	SP1	chr6:32144813-32146520	A549	lung:	n/a	chr6:32145158-32145165 chr6:32145161-32145170 chr6:32146444-32146453 chr6:32145557-32145578 chr6:32146095-32146109 chr6:32146440-32146454 chr6:32146443-32146455 chr6:32146443-32146455 chr6:32145886-32145893
49	ZNF143	chr6:32144852-32146252	K562	blood:	n/a	n/a
50	YY1	chr6:32145215-32146470	GM12878	blood:	n/a	chr6:32145490-32145498 chr6:32145487-32145509 chr6:32145484-32145504 chr6:32145671-32145683

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr6:32145470-32145520	NB4	blood:	n/a
2	chr6:32145470-32145520	NHDF-neo	bronchial:	n/a
3	chr6:32145470-32145520	RPTEC	kidney:	n/a
4	chr6:32145470-32145520	HMEC	breast:	n/a
5	chr6:32145470-32145520	ECC-1	luminal epithelium:	n/a
6	chr6:32145470-32145520	T-47D	breast:	n/a
7	chr6:32145470-32145520	BJ	skin:	n/a
8	chr6:32145470-32145520	HAEpiC	amniotic membrane:	n/a
9	chr6:32145470-32145520	A549	lung:	n/a
10	chr6:32145470-32145520	LNCaP	prostate:	n/a
11	chr6:32145470-32145520	AG09309	skin:	n/a
12	chr6:32145470-32145520	HRE	kidney:	n/a
13	chr6:32145470-32145520	HEEpiC	esophagus:	n/a
14	chr6:32145470-32145520	AG04449	skin:	fetal
15	chr6:32145470-32145520	GM12891	blood:	n/a
16	chr6:32145470-32145520	HCPEpiC	choroid plexus:	n/a
17	chr6:32145470-32145520	SKMC	muscle:	n/a
18	chr6:32145470-32145520	Hepatocyte	liver:	n/a
19	chr6:32145470-32145520	PANC-1	pancreas:	n/a
20	chr6:32145470-32145520	AG09319	gingival:	n/a
21	chr6:32145470-32145520	AoSMC	blood vessel:	n/a
22	chr6:32145470-32145520	HL-60	blood:	n/a
23	chr6:32145470-32145520	CMK	blood:	n/a
24	chr6:32145470-32145520	SAEC	small airway:	n/a
25	chr6:32145470-32145520	HCF	heart:	n/a
26	chr6:32145470-32145520	NT2-D1	testis:	n/a
27	chr6:32145470-32145520	BE2_C	brain:	n/a
28	chr6:32145470-32145520	MCF10A-Er-Src	breast:	n/a
29	chr6:32145470-32145520	U87	brain:	n/a
30	chr6:32145470-32145520	HPAEpiC	pulmonary alveolar:	n/a
31	chr6:32145470-32145520	Caco-2	colon:	n/a
32	chr6:32145470-32145520	PFSK-1	brain:	n/a
33	chr6:32145470-32145520	HCM	heart:	n/a
34	chr6:32145470-32145520	HRCEpiC	kidney:	n/a
35	chr6:32145470-32145520	ProgFib	skin:	n/a
36	chr6:32145470-32145520	HepG2	liver:	n/a
37	chr6:32145470-32145520	HNPCEpiC	eye:	n/a
38	chr6:32145470-32145520	GM12878	blood:	n/a
39	chr6:32145470-32145520	SK-N-SH	brain:	n/a
40	chr6:32145470-32145520	AG10803	skin:	n/a
41	chr6:32145470-32145520	HIPEpiC	eye:	n/a
42	chr6:32145470-32145520	MCF-7	breast:	n/a
43	chr6:32145470-32145520	HEK293	kidney:	embryo
44	chr6:32145470-32145520	IMR90	lung:	fetal
45	chr6:32145470-32145520	PrEC	prostate:	n/a
46	chr6:32145470-32145520	GM19239	blood:	n/a
47	chr6:32145470-32145520	HUVEC	blood vessel:	n/a
48	chr6:32145470-32145520	SK-N-SH_RA	brain:	n/a
49	chr6:32145470-32145520	Hela-S3	cervix:	n/a
50	chr6:32145470-32145520	K562	blood:	n/a

No.	Distal block	Cell Line	Cell type
1	chr6:32124310..32127187-chr6:32144126..32145927,3	MCF-7	breast:
2	chr6:32086106..32088129-chr6:32144055..32145773,2	MCF-7	breast:
3	chr6:32119236..32123483-chr6:32143856..32148114,6	MCF-7	breast:
4	chr6:32116953..32128256-chr6:32128373..32148325,54	K562	blood:
5	chr6:32096431..32099984-chr6:32142713..32147644,5	MCF-7	breast:
6	chr3:183353059..183353568-chr6:32145156..32145724,2	Hela-S3	cervix:
7	chr6:32144165..32146051-chr6:32937722..32940120,2	MCF-7	breast:
8	chr6:32093794..32098047-chr6:32142723..32149394,11	MCF-7	breast:
9	chr6:32117996..32123374-chr6:32143500..32146983,4	MCF-7	breast:
10	chr6:32096229..32099751-chr6:32142407..32148684,10	K562	blood:
11	chr6:32087451..32089617-chr6:32145273..32147612,2	K562	blood:
12	chr6:31939077..31941209-chr6:32144185..32146901,2	MCF-7	breast:
13	chr6:32093550..32095637-chr6:32144069..32145904,2	MCF-7	breast:
14	chr1:9352923..9353490-chr6:32144929..32145668,2	Hela-S3	cervix:
15	chr6:32092992..32099796-chr6:32141629..32147303,15	K562	blood:
16	chr6:32142678..32147635-chr6:32160639..32166698,10	MCF-7	breast:
17	chr6:32088117..32090245-chr6:32144940..32147612,2	K562	blood:
18	chr6:31762749..31764673-chr6:32143789..32146313,2	K562	blood:

Variant related genes	Relation type
AGPAT1	TF binding region
RNF5	TF binding region
AGPAT1	CpG island
RNF5	CpG island
ENSG00000221988	Chromatin interaction
ENSG00000204314	Chromatin interaction
ENSG00000204344	Chromatin interaction
ENSG00000204301	Chromatin interaction
ENSG00000258388	Chromatin interaction
ENSG00000204315	Chromatin interaction
ENSG00000204394	Chromatin interaction
ENSG00000223837	Chromatin interaction
ENSG00000204256	Chromatin interaction
ENSG00000204348	Chromatin interaction
ENSG00000213654	Chromatin interaction
ENSG00000213676	Chromatin interaction
ENSG00000171621	Chromatin interaction
ENSG00000114796	Chromatin interaction

Extended variants
information (count: 38 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:38 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1017945	chr6:31609641-32481240	Genic enhancers Weak transcription Transcr. at gene 5' and 3' Enhancers Active TSS Flanking Active TSS Bivalent Enhancer Strong transcription ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	322 gene(s)	inside rSNPs	diseases
2	nsv601950	chr6:31785438-32492308	Enhancers Bivalent Enhancer Active TSS Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	197 gene(s)	inside rSNPs	diseases
3	nsv601951	chr6:31785438-32496748	Enhancers Flanking Active TSS Strong transcription Weak transcription Bivalent Enhancer Active TSS Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	197 gene(s)	inside rSNPs	diseases
4	nsv601955	chr6:31785453-32484368	Genic enhancers Flanking Bivalent TSS/Enh Enhancers Bivalent Enhancer Active TSS Flanking Active TSS Weak transcription Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	196 gene(s)	inside rSNPs	diseases
5	nsv601956	chr6:31785453-32492308	Strong transcription Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer Enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	197 gene(s)	inside rSNPs	diseases
6	nsv601961	chr6:31868322-32484368	Enhancers Strong transcription Active TSS Transcr. at gene 5' and 3' Genic enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	126 gene(s)	inside rSNPs	diseases
7	esv2758043	chr6:31871512-32209113	Genic enhancers Enhancers Transcr. at gene 5' and 3' Active TSS Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Weak transcription Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	114 gene(s)	inside rSNPs	diseases
8	esv2759415	chr6:31871512-32209113	Flanking Active TSS Enhancers Active TSS Weak transcription Strong transcription Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	114 gene(s)	inside rSNPs	diseases
9	nsv601972	chr6:31947594-32484368	Enhancers Genic enhancers Strong transcription Flanking Active TSS Active TSS Weak transcription Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	91 gene(s)	inside rSNPs	diseases
10	nsv601975	chr6:31949352-32484368	Enhancers Bivalent Enhancer Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Genic enhancers Weak transcription Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	90 gene(s)	inside rSNPs	diseases
11	nsv601976	chr6:31949352-32508887	Weak transcription Active TSS Bivalent Enhancer Enhancers Genic enhancers Strong transcription Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	93 gene(s)	inside rSNPs	diseases
12	nsv601977	chr6:31949352-32651056	Bivalent Enhancer Flanking Active TSS Genic enhancers Enhancers Active TSS Weak transcription Flanking Bivalent TSS/Enh Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	100 gene(s)	inside rSNPs	diseases
13	nsv601980	chr6:31950266-32484368	Enhancers Weak transcription Genic enhancers Active TSS Strong transcription Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	90 gene(s)	inside rSNPs	diseases
14	nsv601982	chr6:31951207-32484368	Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer Active TSS Weak transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	90 gene(s)	inside rSNPs	diseases
15	nsv601983	chr6:31951367-32484368	Enhancers Strong transcription Flanking Active TSS Weak transcription Genic enhancers Active TSS Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	90 gene(s)	inside rSNPs	diseases
16	nsv601984	chr6:31951912-32484368	Enhancers Weak transcription Active TSS Flanking Active TSS Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	90 gene(s)	inside rSNPs	diseases
17	nsv601999	chr6:31952422-32484368	Enhancers Flanking Active TSS Bivalent Enhancer Weak transcription Strong transcription Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	90 gene(s)	inside rSNPs	diseases
18	nsv602000	chr6:31952422-32552416	Genic enhancers Flanking Bivalent TSS/Enh Active TSS Enhancers Weak transcription Bivalent/Poised TSS Flanking Active TSS Transcr. at gene 5' and 3' Strong transcription Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	96 gene(s)	inside rSNPs	diseases
19	nsv602015	chr6:31953467-32481507	Enhancers Weak transcription Transcr. at gene 5' and 3' Strong transcription Flanking Active TSS Bivalent Enhancer Genic enhancers Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	90 gene(s)	inside rSNPs	diseases
20	nsv602016	chr6:31953467-32484368	Weak transcription Active TSS Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Strong transcription Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	90 gene(s)	inside rSNPs	diseases
21	nsv602017	chr6:31953467-32505730	Strong transcription Active TSS Flanking Active TSS Weak transcription Enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	93 gene(s)	inside rSNPs	diseases
22	nsv602018	chr6:31953467-32509985	Flanking Active TSS Weak transcription Enhancers Bivalent Enhancer Active TSS Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	93 gene(s)	inside rSNPs	diseases
23	nsv602019	chr6:31953467-32779803	Transcr. at gene 5' and 3' Active TSS Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Strong transcription Genic enhancers Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	109 gene(s)	inside rSNPs	diseases
24	nsv602029	chr6:31955572-32484368	Active TSS Flanking Active TSS Enhancers Weak transcription Strong transcription Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	90 gene(s)	inside rSNPs	diseases
25	nsv602035	chr6:31959480-32484368	Bivalent Enhancer Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers Weak transcription Strong transcription Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	90 gene(s)	inside rSNPs	diseases
26	nsv602036	chr6:31959878-32484368	Weak transcription Transcr. at gene 5' and 3' Genic enhancers Flanking Active TSS Enhancers Strong transcription Active TSS Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	90 gene(s)	inside rSNPs	diseases
27	nsv602052	chr6:31972034-32481507	Flanking Active TSS Enhancers Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Strong transcription Weak transcription Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	89 gene(s)	inside rSNPs	diseases
28	nsv602053	chr6:31972034-32484368	Active TSS Strong transcription Weak transcription Enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Genic enhancers Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	89 gene(s)	inside rSNPs	diseases
29	nsv602054	chr6:31972034-32779803	Enhancers Active TSS Strong transcription Weak transcription Flanking Active TSS Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	108 gene(s)	inside rSNPs	diseases
30	nsv602086	chr6:31986320-32484368	Enhancers Active TSS Genic enhancers Weak transcription Strong transcription Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	84 gene(s)	inside rSNPs	diseases
31	nsv1024599	chr6:32007556-32481240	Weak transcription Flanking Active TSS Active TSS Enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers Strong transcription ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	82 gene(s)	inside rSNPs	diseases
32	nsv830629	chr6:32043978-32189787	Flanking Active TSS Weak transcription Strong transcription Bivalent Enhancer Enhancers Bivalent/Poised TSS Active TSS Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	69 gene(s)	inside rSNPs	diseases
33	nsv1033939	chr6:32048657-32196256	Enhancers Flanking Bivalent TSS/Enh Strong transcription Bivalent Enhancer Active TSS Bivalent/Poised TSS Flanking Active TSS Weak transcription Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	69 gene(s)	inside rSNPs	diseases
34	nsv462876	chr6:32064726-32171683	Strong transcription Genic enhancers Enhancers Flanking Active TSS Active TSS Weak transcription Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	67 gene(s)	inside rSNPs	diseases
35	nsv602104	chr6:32064726-32171683	Flanking Active TSS Enhancers Weak transcription Active TSS Strong transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	67 gene(s)	inside rSNPs	diseases
36	nsv884706	chr6:32116313-32146492	Active TSS Flanking Active TSS Bivalent Enhancer Weak transcription Strong transcription Enhancers Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	31 gene(s)	inside rSNPs	diseases
37	nsv884707	chr6:32132233-32146492	Active TSS Genic enhancers Flanking Active TSS Weak transcription Strong transcription Enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	28 gene(s)	inside rSNPs	diseases
38	esv11944	chr6:32145042-32148107	Genic enhancers Strong transcription Weak transcription Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region miRNA	21 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:127 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:32142600-32145600	Flanking Active TSS	Primary B cells from cord blood	blood
2	chr6:32142800-32147000	Active TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
3	chr6:32143000-32145600	Flanking Active TSS	Primary T cells fromperipheralblood	blood
4	chr6:32143000-32145600	Flanking Active TSS	Primary T helper cells PMA-I stimulated	--
5	chr6:32143000-32145600	Flanking Active TSS	Primary T helper cells fromperipheralblood	blood
6	chr6:32143000-32147000	Active TSS	ES-WA7 Cell Line	embryonic stem cell
7	chr6:32143000-32147000	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
8	chr6:32143000-32147000	Active TSS	iPS DF 19.11 Cell Line	embryonic stem cell
9	chr6:32143200-32145600	Flanking Active TSS	Primary B cells from peripheral blood	blood
10	chr6:32143200-32145600	Flanking Active TSS	Primary T helper 17 cells PMA-I stimulated	--
11	chr6:32143200-32146600	Active TSS	H1 Cell Line	embryonic stem cell
12	chr6:32143200-32146600	Active TSS	HUES6 Cell Line	embryonic stem cell
13	chr6:32143200-32146600	Active TSS	Right Atrium	heart
14	chr6:32143200-32146800	Active TSS	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
15	chr6:32143200-32146800	Active TSS	iPS-15b Cell Line	embryonic stem cell
16	chr6:32143200-32147000	Active TSS	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
17	chr6:32143200-32147000	Active TSS	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
18	chr6:32143200-32147000	Active TSS	Ovary	ovary
19	chr6:32143200-32147200	Active TSS	ES-I3 Cell Line	embryonic stem cell
20	chr6:32143200-32147200	Active TSS	H9 Cell Line	embryonic stem cell
21	chr6:32143200-32147200	Active TSS	HUES64 Cell Line	embryonic stem cell
22	chr6:32143200-32147200	Active TSS	iPS DF 6.9 Cell Line	embryonic stem cell
23	chr6:32143200-32147200	Active TSS	ES-UCSF4 Cell Line	embryonic stem cell
24	chr6:32143400-32146600	Active TSS	Left Ventricle	heart
25	chr6:32143400-32146800	Active TSS	Foreskin Melanocyte Primary Cells skin01	Skin
26	chr6:32143600-32146600	Active TSS	Psoas Muscle	Psoas
27	chr6:32143600-32146800	Active TSS	Breast Myoepithelial Primary Cells	Breast
28	chr6:32144000-32145600	Flanking Active TSS	Primary hematopoietic stem cells	blood
29	chr6:32144000-32145600	Flanking Active TSS	Primary T helper naive cells fromperipheralblood	blood
30	chr6:32144000-32145600	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Female	--
31	chr6:32144000-32145600	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
32	chr6:32144000-32145600	Flanking Active TSS	Adipose Nuclei	Adipose
33	chr6:32144000-32145600	Flanking Active TSS	Liver	Liver
34	chr6:32144000-32145600	Flanking Active TSS	Fetal Muscle Leg	muscle
35	chr6:32144000-32145600	Flanking Active TSS	Fetal Thymus	thymus
36	chr6:32144000-32145600	Flanking Active TSS	Rectal Mucosa Donor 31	rectum
37	chr6:32144000-32145600	Flanking Active TSS	Dnd41	blood
38	chr6:32144000-32145600	Flanking Bivalent TSS/Enh	HepG2	liver
39	chr6:32144000-32145600	Flanking Active TSS	HUVEC	blood vessel
40	chr6:32144000-32145600	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
41	chr6:32144000-32145800	Flanking Active TSS	Primary hematopoietic stem cells short term culture	blood
42	chr6:32144000-32146000	Flanking Active TSS	Primary neutrophils fromperipheralblood	blood
43	chr6:32144200-32145600	Flanking Active TSS	Primary T cells from cord blood	blood
44	chr6:32144200-32145600	Flanking Active TSS	Primary T cells effector/memory enriched fromperipheralblood	blood
45	chr6:32144200-32145600	Flanking Active TSS	Skeletal Muscle Male	skeletal muscle
46	chr6:32144200-32145600	Flanking Active TSS	Skeletal Muscle Female	skeletal muscle
47	chr6:32144600-32147200	Active TSS	IMR90 fetal lung fibroblasts Cell Line	lung
48	chr6:32144800-32145600	Flanking Active TSS	Primary monocytes fromperipheralblood	blood
49	chr6:32144800-32145600	Flanking Active TSS	Primary mononuclear cells fromperipheralblood	Blood
50	chr6:32144800-32145600	Flanking Active TSS	Placenta	Placenta

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