Variant report

Variant	rs577786620
Chromosome Location	chr17:46392241-46392242
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 1 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv575466	chr17:46391078-46402212	Weak transcription Enhancers Strong transcription Genic enhancers	Chromatin interactive region	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:18 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr17:46373200-46415000	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
2	chr17:46375800-46396400	Weak transcription	Primary T cells fromperipheralblood	blood
3	chr17:46375800-46415800	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
4	chr17:46377200-46421000	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
5	chr17:46380200-46395400	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
6	chr17:46385400-46393400	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
7	chr17:46386200-46407800	Weak transcription	Primary T helper cells fromperipheralblood	blood
8	chr17:46389200-46393200	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
9	chr17:46389200-46393600	Weak transcription	Primary T cells from cord blood	blood
10	chr17:46390200-46429400	Weak transcription	Primary T killer memory cells from peripheral blood	blood
11	chr17:46391000-46396000	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
12	chr17:46391000-46410400	Weak transcription	GM12878-XiMat	blood
13	chr17:46391000-46420200	Weak transcription	Primary B cells from peripheral blood	blood
14	chr17:46391200-46393800	Weak transcription	Primary T helper cells PMA-I stimulated	--
15	chr17:46391200-46421200	Weak transcription	Primary T helper naive cells from peripheral blood	blood
16	chr17:46391400-46405800	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
17	chr17:46392200-46392400	Enhancers	Fetal Kidney	kidney
18	chr17:46392200-46399600	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links