The 2.0 version of rSNPBase

Variant report

Variant rs57784402
Chromosome Location chr4:99533168-99533169
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:81 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:99523000-99545000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
2 chr4:99524000-99535400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
3 chr4:99525400-99533200 Weak transcription Fetal Lung lung
4 chr4:99527200-99534400 Weak transcription Osteobl bone
5 chr4:99527200-99541000 Weak transcription NHLF lung
6 chr4:99528000-99534600 Enhancers Fetal Thymus thymus
7 chr4:99529200-99535400 Enhancers ES-I3 Cell Line embryonic stem cell
8 chr4:99529200-99535400 Enhancers HUES64 Cell Line embryonic stem cell
9 chr4:99529200-99537800 Enhancers Brain Inferior Temporal Lobe brain
10 chr4:99529400-99535000 Enhancers Brain Substantia Nigra brain
11 chr4:99529400-99536200 Enhancers Brain Dorsolateral Prefrontal Cortex brain
12 chr4:99529400-99536400 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
13 chr4:99529400-99536400 Enhancers Brain Angular Gyrus brain
14 chr4:99529400-99536600 Enhancers Fetal Brain Male brain
15 chr4:99529400-99539800 Enhancers Brain Hippocampus Middle brain
16 chr4:99529600-99533600 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
17 chr4:99529600-99535600 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
18 chr4:99529600-99535800 Enhancers Brain Anterior Caudate brain
19 chr4:99529600-99542400 Enhancers Brain Cingulate Gyrus brain
20 chr4:99529600-99543200 Enhancers Cortex derived primary cultured neurospheres brain
21 chr4:99529800-99536400 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
22 chr4:99529800-99538600 Weak transcription Lung lung
23 chr4:99530000-99533800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
24 chr4:99530000-99535400 Weak transcription Fetal Muscle Leg muscle
25 chr4:99530000-99540600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
26 chr4:99530200-99533600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
27 chr4:99530200-99533800 Weak transcription Primary hematopoietic stem cells blood
28 chr4:99530200-99534000 Enhancers Ovary ovary
29 chr4:99530400-99534000 Weak transcription Primary T cells from cord blood blood
30 chr4:99530400-99537400 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
31 chr4:99530400-99538400 Weak transcription HUVEC blood vessel
32 chr4:99530600-99535600 Enhancers ES-UCSF4 Cell Line embryonic stem cell
33 chr4:99530800-99533200 Weak transcription Primary T killer naive cells fromperipheralblood blood
34 chr4:99530800-99534000 Enhancers H9 Cell Line embryonic stem cell
35 chr4:99530800-99534000 Weak transcription Primary T helper naive cells from peripheral blood blood
36 chr4:99530800-99537400 Enhancers Muscle Satellite Cultured Cells --
37 chr4:99531000-99534600 Weak transcription Primary T killer memory cells from peripheral blood blood
38 chr4:99531000-99538000 Enhancers NH-A brain
39 chr4:99531000-99538600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
40 chr4:99531000-99544200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
41 chr4:99531200-99536800 Enhancers Fetal Heart heart
42 chr4:99531200-99541400 Weak transcription Primary T regulatory cells fromperipheralblood blood
43 chr4:99531400-99533200 Weak transcription Thymus Thymus
44 chr4:99531400-99533800 Weak transcription Primary T helper naive cells fromperipheralblood blood
45 chr4:99531400-99533800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
46 chr4:99531400-99534600 Weak transcription HSMMtube muscle
47 chr4:99531400-99538800 Weak transcription Primary T helper cells fromperipheralblood blood
48 chr4:99531800-99533600 Enhancers Breast Myoepithelial Primary Cells Breast
49 chr4:99531800-99533600 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
50 chr4:99531800-99533800 Weak transcription Primary T helper cells PMA-I stimulated --

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Last update: Aug 31, 2015