The 2.0 version of rSNPBase

Variant report

Variant rs577857554
Chromosome Location chr2:32653511-32653512
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:32621000-32669800 Weak transcription ES-WA7 Cell Line embryonic stem cell
2 chr2:32621200-32664600 Weak transcription Fetal Brain Male brain
3 chr2:32621600-32693400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
4 chr2:32640800-32656000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
5 chr2:32640800-32663200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
6 chr2:32641200-32656600 Weak transcription Fetal Brain Female brain
7 chr2:32641200-32664000 Weak transcription H9 Cell Line embryonic stem cell
8 chr2:32641200-32664000 Weak transcription Placenta Amnion Placenta Amnion
9 chr2:32641400-32660600 Weak transcription Colonic Mucosa Colon
10 chr2:32641400-32664200 Weak transcription H1 Cell Line embryonic stem cell
11 chr2:32641600-32655800 Weak transcription Rectal Mucosa Donor 29 rectum
12 chr2:32642800-32656000 Weak transcription Cortex derived primary cultured neurospheres brain
13 chr2:32642800-32656000 Weak transcription Fetal Kidney kidney
14 chr2:32643000-32655800 Weak transcription HUES6 Cell Line embryonic stem cell
15 chr2:32643000-32656000 Weak transcription Primary T cells from cord blood blood
16 chr2:32643000-32660000 Weak transcription Stomach Smooth Muscle stomach
17 chr2:32643200-32656000 Weak transcription Fetal Lung lung
18 chr2:32643200-32656600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
19 chr2:32643400-32654200 Weak transcription Primary hematopoietic stem cells blood
20 chr2:32643400-32655800 Weak transcription Primary neutrophils fromperipheralblood blood
21 chr2:32643400-32656000 Weak transcription HUES48 Cell Line embryonic stem cell
22 chr2:32643600-32656600 Weak transcription iPS-20b Cell Line embryonic stem cell
23 chr2:32643800-32655400 Weak transcription Primary B cells from peripheral blood blood
24 chr2:32644000-32656000 Weak transcription iPS-18 Cell Line embryonic stem cell
25 chr2:32644000-32656000 Weak transcription Fetal Stomach stomach
26 chr2:32644200-32655800 Weak transcription Fetal Thymus thymus
27 chr2:32644800-32655200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
28 chr2:32645400-32654600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
29 chr2:32645400-32656000 Weak transcription Fetal Intestine Large intestine
30 chr2:32646600-32656000 Weak transcription Fetal Intestine Small intestine
31 chr2:32647400-32654600 Weak transcription Primary monocytes fromperipheralblood blood
32 chr2:32647400-32655600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
33 chr2:32647400-32656000 Weak transcription NHEK skin
34 chr2:32647800-32656000 Weak transcription Hela-S3 cervix
35 chr2:32649000-32654400 Weak transcription Primary T regulatory cells fromperipheralblood blood
36 chr2:32650000-32654400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
37 chr2:32650000-32655800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
38 chr2:32650000-32655800 Weak transcription Primary hematopoietic stem cells short term culture blood
39 chr2:32650000-32656000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
40 chr2:32650000-32657000 Weak transcription Thymus Thymus
41 chr2:32650200-32654000 Enhancers A549 lung
42 chr2:32651000-32671600 Weak transcription Fetal Heart heart
43 chr2:32651000-32689000 Weak transcription iPS-15b Cell Line embryonic stem cell
44 chr2:32651000-32695000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
45 chr2:32651200-32654400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
46 chr2:32651200-32654600 Weak transcription Primary T cells fromperipheralblood blood
47 chr2:32651200-32655800 Weak transcription Breast Myoepithelial Primary Cells Breast
48 chr2:32651200-32655800 Weak transcription Primary T killer memory cells from peripheral blood blood
49 chr2:32651200-32655800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
50 chr2:32651200-32655800 Weak transcription Primary mononuclear cells fromperipheralblood Blood

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Last update: Aug 31, 2015