The 2.0 version of rSNPBase

Variant report

Variant rs578041176
Chromosome Location chr12:42511727-42511728
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:112 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:42471800-42524400 Weak transcription Esophagus oesophagus
2 chr12:42474600-42514400 Weak transcription Fetal Muscle Trunk muscle
3 chr12:42474600-42518800 Weak transcription Brain Anterior Caudate brain
4 chr12:42476000-42524400 Weak transcription Gastric stomach
5 chr12:42476200-42524400 Weak transcription Pancreas Pancrea
6 chr12:42476600-42523800 Weak transcription Hela-S3 cervix
7 chr12:42480200-42512000 Weak transcription Sigmoid Colon Sigmoid Colon
8 chr12:42484400-42524800 Weak transcription Right Ventricle heart
9 chr12:42485800-42512200 Weak transcription Brain Angular Gyrus brain
10 chr12:42486000-42513000 Weak transcription Aorta Aorta
11 chr12:42488400-42512000 Weak transcription Osteobl bone
12 chr12:42488600-42518600 Weak transcription Fetal Brain Male brain
13 chr12:42488800-42511800 Weak transcription HepG2 liver
14 chr12:42492200-42512400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
15 chr12:42492200-42518600 Weak transcription K562 blood
16 chr12:42492400-42512200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
17 chr12:42492400-42512200 Weak transcription HUVEC blood vessel
18 chr12:42492600-42511800 Weak transcription Primary T cells from cord blood blood
19 chr12:42493000-42524400 Weak transcription Brain Substantia Nigra brain
20 chr12:42493000-42534400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
21 chr12:42493200-42518400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
22 chr12:42493200-42519200 Weak transcription Primary T killer naive cells fromperipheralblood blood
23 chr12:42497200-42518800 Weak transcription Psoas Muscle Psoas
24 chr12:42498800-42513000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
25 chr12:42499000-42516800 Weak transcription Pancreatic Islets Pancreatic Islet
26 chr12:42499200-42512200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
27 chr12:42499400-42518800 Weak transcription Fetal Kidney kidney
28 chr12:42501000-42518800 Weak transcription Colon Smooth Muscle Colon
29 chr12:42501200-42512200 Weak transcription Muscle Satellite Cultured Cells --
30 chr12:42501400-42511800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
31 chr12:42504800-42514600 Weak transcription Spleen Spleen
32 chr12:42505600-42516800 Weak transcription Skeletal Muscle Male skeletal muscle
33 chr12:42505800-42512200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
34 chr12:42505800-42515200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
35 chr12:42505800-42518400 Weak transcription Fetal Intestine Small intestine
36 chr12:42505800-42518800 Weak transcription H1 Cell Line embryonic stem cell
37 chr12:42505800-42518800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
38 chr12:42505800-42518800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
39 chr12:42505800-42522400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
40 chr12:42505800-42537000 Weak transcription Fetal Stomach stomach
41 chr12:42505800-42537000 Weak transcription Lung lung
42 chr12:42507400-42515200 Weak transcription Placenta Amnion Placenta Amnion
43 chr12:42508400-42512000 Weak transcription Cortex derived primary cultured neurospheres brain
44 chr12:42508400-42524600 Weak transcription Fetal Adrenal Gland Adrenal Gland
45 chr12:42508800-42517000 Weak transcription HUES48 Cell Line embryonic stem cell
46 chr12:42509600-42512200 Weak transcription NH-A brain
47 chr12:42509600-42519400 Weak transcription Fetal Muscle Leg muscle
48 chr12:42509800-42513600 Weak transcription Colonic Mucosa Colon
49 chr12:42509800-42518600 Weak transcription H9 Cell Line embryonic stem cell
50 chr12:42509800-42518800 Weak transcription Brain Germinal Matrix brain

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Last update: Aug 31, 2015