The 2.0 version of rSNPBase

Variant report

Variant rs578047225
Chromosome Location chr8:59361070-59361071
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:102 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr8:59324800-59362000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
2 chr8:59325000-59361200 Weak transcription Psoas Muscle Psoas
3 chr8:59325200-59370800 Weak transcription Skeletal Muscle Male skeletal muscle
4 chr8:59325800-59363200 Weak transcription Hela-S3 cervix
5 chr8:59326600-59361400 Weak transcription Fetal Brain Male brain
6 chr8:59326600-59366200 Weak transcription Gastric stomach
7 chr8:59332600-59364800 Weak transcription Rectal Smooth Muscle rectum
8 chr8:59334400-59364200 Weak transcription HMEC breast
9 chr8:59336000-59361400 Weak transcription Spleen Spleen
10 chr8:59336000-59364800 Weak transcription Sigmoid Colon Sigmoid Colon
11 chr8:59336000-59366600 Weak transcription ES-WA7 Cell Line embryonic stem cell
12 chr8:59337800-59363200 Weak transcription Pancreas Pancrea
13 chr8:59339600-59363400 Strong transcription Monocytes-CD14+_RO01746 blood
14 chr8:59342200-59366200 Weak transcription H9 Cell Line embryonic stem cell
15 chr8:59342400-59365400 Weak transcription iPS-15b Cell Line embryonic stem cell
16 chr8:59349600-59361600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
17 chr8:59349800-59370800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
18 chr8:59351600-59362400 Weak transcription Fetal Stomach stomach
19 chr8:59353400-59364600 Weak transcription Brain Anterior Caudate brain
20 chr8:59353600-59362200 Weak transcription Primary T killer memory cells from peripheral blood blood
21 chr8:59353800-59370400 Weak transcription Esophagus oesophagus
22 chr8:59354600-59364200 Weak transcription Primary T killer naive cells fromperipheralblood blood
23 chr8:59354800-59361200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
24 chr8:59354800-59361400 Weak transcription Brain Germinal Matrix brain
25 chr8:59354800-59361800 Weak transcription HSMMtube muscle
26 chr8:59354800-59362400 Weak transcription H1 Cell Line embryonic stem cell
27 chr8:59354800-59362600 Strong transcription Liver Liver
28 chr8:59354800-59362800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
29 chr8:59354800-59363200 Weak transcription Fetal Kidney kidney
30 chr8:59354800-59363200 Weak transcription Rectal Mucosa Donor 31 rectum
31 chr8:59354800-59363400 Weak transcription Primary T helper naive cells from peripheral blood blood
32 chr8:59354800-59363800 Weak transcription Brain Substantia Nigra brain
33 chr8:59354800-59364000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
34 chr8:59354800-59364200 Weak transcription NHEK skin
35 chr8:59354800-59364400 Weak transcription Fetal Muscle Leg muscle
36 chr8:59354800-59364600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
37 chr8:59354800-59366200 Weak transcription Brain Angular Gyrus brain
38 chr8:59354800-59366600 Weak transcription HepG2 liver
39 chr8:59354800-59367000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
40 chr8:59354800-59370200 Weak transcription HSMM muscle
41 chr8:59355000-59363400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
42 chr8:59355200-59364200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
43 chr8:59355400-59361400 Weak transcription A549 lung
44 chr8:59355400-59366200 Weak transcription iPS-18 Cell Line embryonic stem cell
45 chr8:59355600-59362400 Weak transcription Fetal Heart heart
46 chr8:59355600-59363200 Weak transcription Brain Hippocampus Middle brain
47 chr8:59355600-59364400 Weak transcription Primary T helper naive cells fromperipheralblood blood
48 chr8:59355600-59366000 Weak transcription Cortex derived primary cultured neurospheres brain
49 chr8:59355800-59361200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
50 chr8:59355800-59369600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin

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Last update: Aug 31, 2015